Lysobacter gummosus: LG3211_4603
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Entry
LG3211_4603 CDS
T04163
Name
(GenBank) RNA polymerase sigma factor, sigma-70 family protein
KO
K02405
RNA polymerase sigma factor FliA
Organism
lgu
Lysobacter gummosus
Pathway
lgu02020
Two-component system
lgu02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
LG3211_4603
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
LG3211_4603
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgu03021
]
LG3211_4603
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
lgu02035
]
LG3211_4603
Transcription machinery [BR:
lgu03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
LG3211_4603
Bacterial motility proteins [BR:
lgu02035
]
Flagellar system
Flagellar assembly proteins
Stator
LG3211_4603
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r2
Motif
Other DBs
NCBI-ProteinID:
ALN93537
UniProt:
A0ABY3XDT2
LinkDB
All DBs
Position
5142243..5143001
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AA seq
252 aa
AA seq
DB search
MISSAAIAMDETQAAPAPDAALWAAMQQENSSQAREAIFLHYLPYAQAIAANIYGGRYSK
DVEFRDFQQLAYIGLLDAMARFDHSLGNSFKTFCTARITGSVLDGIKQLSDTQEQISLKR
RLQRDRLNSLKDNSSPRSRKLTQTLSELAVGLAIGHMLEGTGMFANGQEAIRHDGYEAVA
WHQTCRSLRQAVGMLPTDMAKVISYHYFHSLPFEQIAGILGLSKGRISQIHRAGLGLLRE
KIQPHQPSRTKK
NT seq
759 nt
NT seq
+upstream
nt +downstream
nt
atgatttcttctgccgccatcgccatggacgaaacccaggccgcgcccgctccggacgcg
gcgctgtgggcggcgatgcagcaggaaaactccagccaggcgcgcgaagccatcttcctg
cactacctgccgtacgcgcaggcgatcgcggccaacatctacggcgggcgctacagcaag
gacgtggagttccgcgacttccagcaattggcctacatcggcctgctcgatgcgatggcg
cggttcgatcactcgctgggcaattcgttcaagaccttctgcaccgcgcgcatcaccggc
agcgtgctcgacggcatcaagcagctcagcgacacgcaggagcagatctcgctcaagcgc
cgtctgcagcgcgaccgcctgaattcgctcaaggacaacagcagcccgcgcagccgcaag
ctgacgcagacattgtccgaactcgccgtcggcctggccatcggccacatgctcgaaggc
accggcatgttcgccaacggtcaggaagccattcgccacgacggctacgaggcggtcgcc
tggcatcagacctgccgctcgctgcgccaggcggtgggcatgctgccgaccgacatggcc
aaggtcatcagctatcactatttccattcgctgccgttcgaacagatcgccggcattctg
ggcctgagcaagggccgcatctcgcagatccatcgcgccgggctgggcctgctgcgcgag
aagatccaaccccatcaaccttcgcggaccaagaaatga
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