Lysobacter gummosus: LG3211_4959
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Entry
LG3211_4959 CDS
T04163
Symbol
priA
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lgu
Lysobacter gummosus
Pathway
lgu03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LG3211_4959 (priA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_4959 (priA)
Enzymes [BR:
lgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LG3211_4959 (priA)
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LG3211_4959 (priA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
AAA_30
AAA_19
RecA
Zn_ribbon_6
Motif
Other DBs
NCBI-ProteinID:
ALN93892
LinkDB
All DBs
Position
5579167..5581410
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AA seq
747 aa
AA seq
DB search
MFEALPLPPPTVWRVALPLPLPRLFDYLPPPGDAGSDPVGARVQVPFGRRELVGVVAETG
APEHDTDPAALKAAIARLDPDPLLDGELLASLRWLARYTHAPLGEVLATALPGPLRHGEP
LPDTHAWAWRLSEAGATAREGLRAGKPRRLADLLAEHGALDEDRLDDLLEDWRSAARALA
KREQAERIAIPAVHHAPAPRPGPALNDEQQAAVDALLAARGFTGFLLDGVTGSGKTEVYL
HAIADCLARGKQALILVPEIGLTPQTLARFRARLGVPVHALHSGLSDGERARTWAAFARG
EARVAVGTRSAVFLPLREPGLIVIDEEHDGSFKQLDGIRYHARDFALVRAKALDVPVLLG
SATPSLESLRNAQAGRYGHLHLKRRAGQAQPPRVRVLDVRKRPLQAGLSPELIERIHAEL
RAGGQVLVFKNRRGYAPVLLCHDCGWTAHCPRCSTPLKGTPMTVHAGGRRLQCHHCGTRR
PAPDACPDCGGLALQSQGAGTERIEESLAARFPEFPVLRIDRGSTQKRDALENLLKEFGT
TPGVLVGTQMLAKGHDLPNLTLVAVVGIDEGLFSADFRAREKLAQLLIQVAGRAGRADKL
GEVILQTHHPEHELLHTLLSGGYPAFAEVELAQREAAGFPPFAHMALIRAEAQQVETANA
FLALARREFEAVAAQRAGAARTTLEVNGPVPAPMPRRAGYLRAQLILSAPQRPELHAALD
AALPAIYAAPEARKVRWSLDVDPADLY
NT seq
2244 nt
NT seq
+upstream
nt +downstream
nt
atgttcgaggcccttcccctgccgccgccgaccgtatggcgcgtcgctttgccgctgccg
ctgccgcgcctgttcgactatctgccgccgcccggcgatgccggttccgacccggtcggc
gcgcgcgtgcaggtgccgttcgggcgccgcgaactggtcggcgtggtcgccgaaaccggc
gcgcccgagcacgacaccgacccggccgcgctgaaggccgcgatcgcccggctcgacccg
gacccgcttctggacggcgaactgctggcctcgctgcgctggctggcccgctacacccac
gccccgctcggcgaggtgctggcgaccgccctgcccggcccgctgcgccacggcgagccg
ctgcccgacacccacgcctgggcctggcgcctgagcgaagccggggcgaccgcgcgcgaa
ggcctgcgcgccggcaagccgcgccgcctcgccgacctgctggccgaacacggcgcgctc
gacgaagaccgcctcgacgacctgcttgaggactggcgcagcgccgcccgcgccctggcc
aagcgcgagcaggccgagcgcatcgccatcccggccgtccaccacgccccggcgccgcgc
cccgggccggcgctcaacgacgaacagcaggccgcggtcgatgcgttgctggccgcgcgc
ggcttcaccggcttcctgctcgacggcgtcaccggcagcggcaagaccgaggtctacctg
cacgccatcgccgactgtctggcgcgcggcaagcaggcgctgatcctggtgccggagatc
ggcctgaccccgcagaccctggcgcgcttccgcgctcgccttggcgtgccggtgcacgcg
ctgcactcgggcctgagcgacggcgagcgcgcccgcacctgggccgcgttcgcgcggggc
gaggcgcgggtcgcggtcggcacccgctcggcggtgttcctgccgctgcgcgagccgggc
ctgatcgtcatcgacgaagaacacgacggcagcttcaagcagctcgacggcatccgctac
cacgcccgcgacttcgccctggtccgggccaaggccctggacgtgccggtgctgctgggc
agcgccacgccgtcgctggagtcgctgcgcaacgcccaggccgggcgctacggccacctg
cacctcaagcgccgcgccggccaggcgcagccgccgcgggtgcgcgtgctagacgtgcgc
aagcggccgctgcaggccgggctgtcgccggaactcatcgaacgcatccacgccgagctg
cgcgccggcggccaggtgctggtgttcaagaaccggcgcggctacgccccggtgctgctg
tgccacgactgcggctggaccgcgcactgcccgcgctgcagcaccccgctcaagggcacg
ccgatgaccgtgcacgccggcggccgccgtctgcagtgccatcactgcggcacgcgccgg
ccggcgcccgacgcctgcccggattgcggcggcctggccctgcaatcgcagggcgccggc
accgagcgcatcgaggaatcgctggcggcgcgcttcccggagtttccggtgctgcgcatc
gatcgcggcagcacgcaaaagcgcgacgctctggaaaatctgctgaaggaattcggcacc
acaccgggcgtgctggtcggcacccagatgctcgccaagggccacgatctgcccaacctg
accctggtcgcggtggtcggcatcgacgaaggcttgttcagcgccgacttccgcgcccgc
gaaaaactcgcgcagttgctgatccaggtcgccggccgcgccggccgcgcggacaagctc
ggcgaagtaattctgcaaacccatcaccccgaacacgaactgctgcacacgctgctgtcg
ggcggctatccggccttcgccgaagtcgaactggcgcagcgcgaagccgcggggtttccg
ccgttcgcgcacatggcgctgatccgcgccgaggcgcagcaggtggaaacggccaatgcc
ttcctggcgctggcgcggcgcgaattcgaagccgtcgccgcgcaacgcgcgggcgccgcc
cgcaccacgctggaggtcaacggcccggtgcccgcgccgatgccgcgacgcgccggttat
ctgcgcgcgcagctgatcctgtcggcaccgcagcggccggaactgcacgcagcgctcgat
gcggcgctgccggcgatctacgccgcgccggaagcgcgcaaggtacgctggtcgctggat
gtggatccggccgatctgtactga
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