Lysobacter gummosus: LG3211_5213
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Entry
LG3211_5213 CDS
T04163
Name
(GenBank) eukaryotic DNA topoisomerase I, catalytic core family protein
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgu03032
]
LG3211_5213
03400 DNA repair and recombination proteins [BR:
lgu03400
]
LG3211_5213
Enzymes [BR:
lgu01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
LG3211_5213
DNA replication proteins [BR:
lgu03032
]
Prokaryotic type
DNA Topoisomerases
LG3211_5213
DNA repair and recombination proteins [BR:
lgu03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LG3211_5213
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_I
Top1B_N_bact
Motif
Other DBs
NCBI-ProteinID:
ALN94146
LinkDB
All DBs
Position
complement(5875973..5877052)
Genome browser
AA seq
359 aa
AA seq
DB search
MSERTGSEVPAATNRRAARAAGLRYVNDGEPGIARRRAGRGFAYRNARGKPVRAAKTLER
IRALAIPPAYTEVWICADARGHLQATGRDARGRKQYRYHPQWRSVRDEGKFERVIAFGRA
LPALRRRVRRDLKLPGFPREKVLAMVVAVMAQTLLRIGNDEYARSNRSFGLTTLRNRHVE
FLRGGRARFRFRGKGGQAHEVELDNVRLTRLVRACQQLPGQALFQYRDDDGRVQPVDSGA
VNAYLHEAMGADFTAKDFRTWGGTLAAFRRLAHLPLPAPARGSAPSERALASLQNEVIGE
VARALRNTPSVCRKAYIDPAVFAGWREGRLGRYAQDARGELQWERAALRFLAQSRRNGT
NT seq
1080 nt
NT seq
+upstream
nt +downstream
nt
atgagcgagcgcaccggatcggaggttcccgccgcgaccaaccgccgcgccgcgcgcgcg
gcgggtctgcgctacgtcaacgacggcgagccgggcatcgcccgccgccgcgccggccgc
ggtttcgcttatcgcaacgcgcgcggcaagccggtgcgcgcggccaagacgctcgaacgc
atccgcgcgctggcgattccgccggcctacaccgaggtgtggatctgcgccgacgcgcgc
ggccatctgcaggcgaccggccgcgatgcgcgcggacgcaagcagtatcgctatcacccg
caatggcgctcggtccgcgacgaaggcaagttcgagcgcgtgatcgccttcggccgcgcg
ctgccggcgttgcgccggcgggtgcggcgcgacctcaagttgccgggctttccgcgcgag
aaggtgctggcgatggtggtggcggtgatggcgcaaaccttgctgcgcatcggcaacgac
gaatacgcgcgcagcaatcgttccttcggcctgaccacgctgcgcaatcgccacgtcgag
ttcctgcgcggcggccgcgcgcgctttcgtttccgcggcaagggcgggcaagcgcacgag
gtcgaactcgacaacgtcaggctgacgcggctggtccgcgcctgccagcaattgccgggg
caggcgctgttccagtaccgcgacgacgacggccgcgtgcagccggtggattccggcgcg
gtcaacgcctacctgcacgaggccatgggcgcggatttcaccgcgaaggatttccgcacc
tggggtgggacgctggcggcgttccgtcggctggcccatctgccgctgccggcgcccgcg
cgcggcagcgcgccgagcgaacgcgcattggcctcgctacagaacgaagtgatcggcgag
gtcgcgcgcgcgttgcgcaacacaccgtcggtatgccgcaaggcgtacatcgatccggcc
gtgttcgccggttggcgcgaaggacgcctgggccgctacgcgcaggacgcgcgcggcgaa
ttgcagtgggaacgcgcggcgttgcggtttctcgcgcagtcgcggcgcaacgggacttga
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