Lysobacter gummosus: LG3211_5376
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Entry
LG3211_5376 CDS
T04163
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
KO
K03650
tRNA modification GTPase [EC:3.6.-.-]
Organism
lgu
Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:
lgu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgu03016
]
LG3211_5376 (trmE)
Transfer RNA biogenesis [BR:
lgu03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
LG3211_5376 (trmE)
Prokaryotic type
Methyltransferases
LG3211_5376 (trmE)
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MnmE_helical
TrmE_N
MMR_HSR1
FeoB_N
Dynamin_N
RsgA_GTPase
GTP_EFTU
ABC_tran
AAA_28
MCM
MMR_HSR1_Xtn
AAA_27
Ras
AIG1
AAA_16
AAA_29
Motif
Other DBs
NCBI-ProteinID:
ALN94308
LinkDB
All DBs
Position
complement(6052231..6053610)
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AA seq
459 aa
AA seq
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MILPMTPPAARDTIAAIATAPGAGGVGIVRLSGSRSREIAQTIAARELQPRHAHYVRFRD
DAGDTIDDGIALYFAAPASYTGEDVVELQAHGGPALLEELLARACALGARRARPGEFSER
AFLEGRLDLAQAEAVADLIAAGDARAARAARRALDGEFSRRVEALAADLLAIRVHVEAAI
DFADEPLDTLGGAALRTRFAAASTSLDDLLAAAERGRRLRDGLHAVIVGPPNAGKSSLLN
ALAGSERAIVTDIAGTTRDLLHETVRLDGVELTLVDTAGLRDGGDAIEREGMRRARGELT
RADLAIVVIDARDPHIGLASVADAIIDVPARLFVYNKIDLLESDYDSPGPADIGGENRVF
VSAQTGAGLDALHARLRALAQGDAADAAEGAFTARSRHVDALLRAREELDDARAQLDHEM
LDLAAEALRQAHEALGEITGRVRADDLLGHIFSSFCIGK
NT seq
1380 nt
NT seq
+upstream
nt +downstream
nt
atgatcctccccatgaccccgcccgccgcccgcgacaccatcgccgccattgccaccgcg
cccggcgccggcggcgtcggcatcgtgcgtttgtccggttcgcgatcgcgcgagatcgcg
cagaccatcgccgcgcgcgaactgcagccgcgtcacgcccactacgtgcgtttccgcgat
gacgccggcgacaccatcgacgacggcatcgcgctctatttcgccgcgccggccagctac
accggcgaggacgtggtcgaactgcaggcccacggcggcccggcgctgctcgaagaactg
ctggcgcgcgcatgcgccttgggcgcgcggcgggcgcgaccgggcgaattcagcgaacgc
gcgtttcttgaaggtcgcctggatctggcccaggccgaagccgttgccgatctgatcgcc
gctggcgatgcgcgcgccgcccgcgccgcgcggcgcgccctcgacggcgagttctcgcgc
cgcgtcgaagccctcgccgccgatctgctcgcgatccgcgtgcacgtggaagcggcgatc
gatttcgccgacgaaccgctcgacaccctcggcggcgccgcattgcgcacgcgcttcgcc
gccgcctcgacctcgctcgacgatctgctcgccgccgccgaacgcggccgccgtctgcgc
gacggtctgcatgcggtgatcgtcggcccgcccaacgccggcaagagttcgctgctcaac
gcgctggccggcagcgagcgcgccatcgtcaccgacatcgccggcaccacccgcgatctg
ctgcacgaaaccgtgcgcctggacggcgtcgaactgaccctggtcgataccgctggcctg
cgcgacggcggcgacgcgatcgaacgcgaaggcatgcgtcgcgcgcgcggcgagctgacc
cgcgcggacctggcgatcgtggtcatcgatgcgcgcgacccgcacatcgggctggcctcg
gtggcggacgcgatcatcgacgtaccggcgcgcttgttcgtctacaacaagatcgacctg
ctcgaatccgattacgactcgcccggcccggccgatatcggcggcgagaatcgcgtattc
gtttccgcccagaccggcgccggcctggacgcgctgcacgcgcgtctgcgcgcgttggcg
cagggcgatgcggcggatgcggccgaaggcgcgttcaccgcgcgctcgcgacacgtcgat
gccttgctgcgcgcgcgcgaagaactcgacgacgcgcgcgcccagctcgatcacgaaatg
ctcgacctcgccgccgaagcgttacggcaagcgcatgaagccctgggcgaaatcaccggc
cgcgtgcgcgcggacgatctgctcgggcatatcttttcgagcttctgcatcggcaaataa
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