KEGG   Lysobacter gummosus: LG3211_5376
Entry
LG3211_5376       CDS       T04163                                 
Symbol
trmE
Name
(GenBank) tRNA modification GTPase TrmE
  KO
K03650  tRNA modification GTPase [EC:3.6.-.-]
Organism
lgu  Lysobacter gummosus
Brite
KEGG Orthology (KO) [BR:lgu00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03016 Transfer RNA biogenesis [BR:lgu03016]
    LG3211_5376 (trmE)
Transfer RNA biogenesis [BR:lgu03016]
 Eukaryotic type
  tRNA modification factors
   Other tRNA modification factors
    LG3211_5376 (trmE)
 Prokaryotic type
   Methyltransferases
    LG3211_5376 (trmE)
SSDB
Motif
Pfam: MnmE_helical TrmE_N MMR_HSR1 FeoB_N Dynamin_N RsgA_GTPase GTP_EFTU ABC_tran AAA_28 MCM MMR_HSR1_Xtn AAA_27 Ras AIG1 AAA_16 AAA_29
Other DBs
NCBI-ProteinID: ALN94308
LinkDB
Position
complement(6052231..6053610)
AA seq 459 aa
MILPMTPPAARDTIAAIATAPGAGGVGIVRLSGSRSREIAQTIAARELQPRHAHYVRFRD
DAGDTIDDGIALYFAAPASYTGEDVVELQAHGGPALLEELLARACALGARRARPGEFSER
AFLEGRLDLAQAEAVADLIAAGDARAARAARRALDGEFSRRVEALAADLLAIRVHVEAAI
DFADEPLDTLGGAALRTRFAAASTSLDDLLAAAERGRRLRDGLHAVIVGPPNAGKSSLLN
ALAGSERAIVTDIAGTTRDLLHETVRLDGVELTLVDTAGLRDGGDAIEREGMRRARGELT
RADLAIVVIDARDPHIGLASVADAIIDVPARLFVYNKIDLLESDYDSPGPADIGGENRVF
VSAQTGAGLDALHARLRALAQGDAADAAEGAFTARSRHVDALLRAREELDDARAQLDHEM
LDLAAEALRQAHEALGEITGRVRADDLLGHIFSSFCIGK
NT seq 1380 nt   +upstreamnt  +downstreamnt
atgatcctccccatgaccccgcccgccgcccgcgacaccatcgccgccattgccaccgcg
cccggcgccggcggcgtcggcatcgtgcgtttgtccggttcgcgatcgcgcgagatcgcg
cagaccatcgccgcgcgcgaactgcagccgcgtcacgcccactacgtgcgtttccgcgat
gacgccggcgacaccatcgacgacggcatcgcgctctatttcgccgcgccggccagctac
accggcgaggacgtggtcgaactgcaggcccacggcggcccggcgctgctcgaagaactg
ctggcgcgcgcatgcgccttgggcgcgcggcgggcgcgaccgggcgaattcagcgaacgc
gcgtttcttgaaggtcgcctggatctggcccaggccgaagccgttgccgatctgatcgcc
gctggcgatgcgcgcgccgcccgcgccgcgcggcgcgccctcgacggcgagttctcgcgc
cgcgtcgaagccctcgccgccgatctgctcgcgatccgcgtgcacgtggaagcggcgatc
gatttcgccgacgaaccgctcgacaccctcggcggcgccgcattgcgcacgcgcttcgcc
gccgcctcgacctcgctcgacgatctgctcgccgccgccgaacgcggccgccgtctgcgc
gacggtctgcatgcggtgatcgtcggcccgcccaacgccggcaagagttcgctgctcaac
gcgctggccggcagcgagcgcgccatcgtcaccgacatcgccggcaccacccgcgatctg
ctgcacgaaaccgtgcgcctggacggcgtcgaactgaccctggtcgataccgctggcctg
cgcgacggcggcgacgcgatcgaacgcgaaggcatgcgtcgcgcgcgcggcgagctgacc
cgcgcggacctggcgatcgtggtcatcgatgcgcgcgacccgcacatcgggctggcctcg
gtggcggacgcgatcatcgacgtaccggcgcgcttgttcgtctacaacaagatcgacctg
ctcgaatccgattacgactcgcccggcccggccgatatcggcggcgagaatcgcgtattc
gtttccgcccagaccggcgccggcctggacgcgctgcacgcgcgtctgcgcgcgttggcg
cagggcgatgcggcggatgcggccgaaggcgcgttcaccgcgcgctcgcgacacgtcgat
gccttgctgcgcgcgcgcgaagaactcgacgacgcgcgcgcccagctcgatcacgaaatg
ctcgacctcgccgccgaagcgttacggcaagcgcatgaagccctgggcgaaatcaccggc
cgcgtgcgcgcggacgatctgctcgggcatatcttttcgagcttctgcatcggcaaataa

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