Lactococcus garvieae Lg2: LCGL_0004
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Entry
LCGL_0004 CDS
T01963
Name
(GenBank) ATP-dependent exonuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lgv
Lactococcus garvieae Lg2
Brite
KEGG Orthology (KO) [BR:
lgv00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgv03400
]
LCGL_0004
Enzymes [BR:
lgv01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
LCGL_0004
DNA repair and recombination proteins [BR:
lgv03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
LCGL_0004
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_12
DEAD
PDDEXK_1
KdpD
AAA_30
eWH_GTF3C1
ResIII
AAA_7
Bromo_TP
Motif
Other DBs
NCBI-ProteinID:
BAK59464
UniProt:
F9VGI1
LinkDB
All DBs
Position
6025..9588
Genome browser
AA seq
1187 aa
AA seq
DB search
MTEVKLTPEQEEAIYSQGHNILVSASAGSGKTFVMANRIVEKIKSGIDIESLFISTFTKK
AAAELRMRLEKDLKKASYKSQDSVEKQRIKLALQKLPHADIGTMDSFTQKLLRENFNRVD
IEPNFRILADQTESDLLKQEVFDDLVEQYLSEQTEIKETAKIDKKTFEKLIKNFSKDRNI
KGFQSVVYTVYNFASATENPENWLKNEFLKGFAFYQKFSDLPESFSQDVALQLEAFILDL
QKALAEKNLTGKTLEKAQIVVDNQEHLLGSLARRDYLQFTEIFRSLDFSRWSLKKDEILA
ESFKSVIGTKTDPGLVRDFLEKIKHLSTIEKYQPEAKVLAENLQKFVLYFYNVYLERKRS
ENAFEYSDIAHFAIKILEENPDVAMAYRNKYSEIMIDEYQDTSHVQEAMLRLLSKNGDGS
DNLFMVGDIKQSIYGFRLADPRLFLKKYTAYADETNPNQLIRLKENFRSRGEVLSFTNEV
FKHLMDEEVGEMIYGKEEELVQGNLVDYPEQLEKNFYPELLLYEEDTSEEESEQMSDGEI
KVVAQQIKELIASDENLEYKDIALLVRSKSQNNKIEDILKAYDIPVVLDEGRVDFLKSLE
VTLILDVLRAIDNPLYDIPLVATLRSPMFNFTEDELTRISLNAGSDTRFWQKLQLNDSEL
INKALKTKIASFLEKFTEWRKLVNEVPIHELLWKIYTETYYMDYVGALPNGEMRQANLHA
LSVRAESYESSGYKGLFRFIKMIDKFMEQNNDLASVNIKLPQNAVRVMTFHKSKGLEFDV
VFLMNLQTKFNQKDLRDSVILTRENGLGMKYTADLKNESAVEADFPYALVKMETLPYFVN
KDLKRNAMLSEEMRVLYVAFTRAKKKLYMVGKIKQKELEKYGEAKLEKGILPLKYRQAAN
GYQHWLLALQKAHKLPMKFKVIKAADLQGVDKKFTVYPDFKKLAEDAKKFDKVMDSLSDV
KQARAILDYQYPKAAATKLSSIQTPSQVKKRSYEKQLELGNVLPSSEYERVKQLDMLDLG
QHKITAAEIGSATHSFMQYADFSRPNLFDFQQTLDQMDLLDEVKNKIDLPKILTLFDTDF
GKVLVDNVERTTKEAPFSMLKTDEVAQEQYIVRGICDGFIKFEDKIILFDYKTDYFRNKA
QIAEIKKNYEVQMELYADALRKAYHVNQVDKYLILLGGPQKVVVERM
NT seq
3564 nt
NT seq
+upstream
nt +downstream
nt
atgactgaagtaaaattgacacccgaacaggaagaagcaatatatagtcaaggacataat
atactcgtttcagcaagtgctggatcagggaagacctttgtcatggccaaccgtattgtt
gaaaaaataaaaagtggcattgatattgagagcttgttcatttcaacctttactaaaaaa
gcggcagcagaattacgcatgcgtttagaaaaagatctaaagaaagcaagttataaatca
caagatagtgttgaaaaacaacggattaaactggcgctacaaaagcttcctcatgcagat
attggtacaatggatagctttacacaaaaactgttacgagaaaattttaatcgtgtagat
attgagcctaattttagaattctagcagatcagacagaaagtgatctcttgaaacaagaa
gtctttgatgatcttgtcgagcagtatctttcagagcaaacagaaatcaaagaaacagca
aaaatagataaaaagacctttgaaaaactgataaaaaacttttccaaagatcggaatatc
aaaggtttccaaagtgtggtttacacggtttacaactttgcttcagcaacagaaaaccct
gaaaattggttgaaaaatgaatttcttaaaggttttgctttttatcaaaaattctctgat
ttgcctgaatcattttcacaagatgtagccttacaactcgaagcctttattttagattta
cagaaagcactggcggaaaaaaatcttacgggtaaaactttagaaaaagcacaaattgta
gtggataatcaagaacatcttcttggcagtttagctcggagagattatcttcaatttacg
gaaatttttagatctcttgacttttcgcgctggtcattaaagaaagatgaaattttagct
gaaagttttaaatctgtgataggaaccaagaccgatccaggcctcgtaagagatttttta
gaaaaaataaaacacttgtcaacgattgaaaaatatcagcctgaagcaaaagttttggct
gaaaatcttcaaaaattcgttctatatttttataatgtctatctggagcgaaaacgttcg
gaaaatgcatttgaatattcggatattgctcattttgcaattaaaatattagaagaaaat
ccagatgtcgcaatggcttatcgcaataaatacagtgagataatgattgacgagtatcaa
gataccagtcatgtccaagaggcgatgttacgattgctgagtaaaaatggtgacggttct
gataatctttttatggttggtgatattaagcaatcgatatatggttttcgtttggcggat
cctcgtctttttctcaaaaaatacacggcctatgctgatgaaacaaatcctaatcaactg
attcgtcttaaagaaaattttcgttcacgcggagaagtcctttccttcacaaatgaggta
tttaaacatttgatggatgaagaagtgggagaaatgatctacggtaaagaagaagaattg
gtccaaggaaatcttgtagattatccggagcagttagaaaaaaacttttaccctgagctc
cttctttatgaagaagatacttcagaagaagagtcagaacaaatgagtgatggtgaaata
aaagttgtcgctcaacaaattaaggagctcatcgcgtctgatgagaacttagaatataaa
gatattgctcttttggtacgttccaaatctcaaaataataaaattgaagatatcttaaaa
gcttatgatattccagttgttttggatgagggacgtgttgactttttgaaatctctcgaa
gttaccttaattttagatgtcttgcgtgccatagataatccgctctatgatattcctttg
gtagccaccttacgctcaccaatgtttaactttacagaggatgaacttacaaggatcagt
ttgaatgctggttctgatacgcgtttttggcagaagttgcagctcaacgatagtgagctg
ataaataaagcacttaaaacaaagattgcttcctttttagagaagtttacagagtggcgt
aaacttgtaaacgaagtccctatccatgaacttctttggaaaatttatacagaaacttat
tatatggactatgtcggggcactaccaaatggcgagatgcgtcaagcgaatcttcatgct
ctttcagtaagggcggaatcctatgaaagttcgggctataaaggtcttttccgattcatc
aaaatgattgataaatttatggaacaaaacaatgaccttgcttctgtgaatatcaaattg
ccgcaaaatgcggtaagagtaatgacttttcataagtccaaagggttagaatttgatgtt
gtttttctcatgaatctccaaaccaagttcaaccaaaaagatctaagagattcggtgata
cttacacgggaaaatggcttaggaatgaaatatactgctgatttaaaaaatgagtcagct
gtagaggcagattttccttatgctttagttaaaatggaaaccttaccgtatttcgtcaat
aaggacttgaagcgaaatgcaatgctttcagaagaaatgcgtgttctttatgttgccttt
acaagagcgaagaaaaaactctatatggtcggtaaaatcaaacaaaaagagttagaaaaa
tatggggaagcgaagctagaaaaaggaattttacctcttaaatatcgtcaagctgcaaat
ggctatcaacattggttgctggcgcttcaaaaagcacataagttaccgatgaaatttaaa
gtaatcaaggcggctgatttacaaggggttgataagaagtttacagtttatcctgacttt
aaaaaactggcagaagatgcgaaaaaatttgataaagtaatggatagcttatcggatgta
aaacaagcgcgtgccatattagattatcaatatccaaaggcagcagcaacgaaactttca
agcattcaaactcccagtcaagtgaaaaaaagaagttacgaaaagcaattagagttagga
aatgttttgccatcaagtgagtatgaacgtgtgaaacagttggatatgttggatcttgga
caacataaaattaccgctgccgaaataggttccgctacccatagttttatgcagtatgca
gatttttcacgaccaaacttattcgacttccaacaaaccttagatcagatggaccttctg
gatgaagtaaaaaataaaattgatttacccaaaatcctgactttatttgacacagatttt
ggtaaagtgctggttgataacgtggagcgtacaactaaggaagcacctttttctatgttg
aaaacagatgaagttgcacaagaacaatatattgttcgaggaatatgtgatggctttata
aaatttgaagataaaattattttgtttgactataagacagattatttccgcaataaagcg
cagattgcggaaatcaaaaaaaattatgaagttcagatggagctctatgcagatgcgtta
agaaaggcctatcatgtcaaccaagttgacaagtatttgattttattaggtggacctcaa
aaagtcgttgtagaaaggatgtaa
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