Lactococcus garvieae Lg2: LCGL_0322
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Entry
LCGL_0322 CDS
T01963
Name
(GenBank) DNA polymerase III alpha subunit
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lgv
Lactococcus garvieae Lg2
Pathway
lgv03030
DNA replication
lgv03430
Mismatch repair
lgv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCGL_0322
03430 Mismatch repair
LCGL_0322
03440 Homologous recombination
LCGL_0322
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgv03032
]
LCGL_0322
03400 DNA repair and recombination proteins [BR:
lgv03400
]
LCGL_0322
Enzymes [BR:
lgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCGL_0322
DNA replication proteins [BR:
lgv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCGL_0322
DNA repair and recombination proteins [BR:
lgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCGL_0322
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
tRNA_anti-codon
HHH_6
DUF1847
Motif
Other DBs
NCBI-ProteinID:
BAK59782
UniProt:
F9VBT1
LinkDB
All DBs
Position
328516..331632
Genome browser
AA seq
1038 aa
AA seq
DB search
MFAQLNTKTEYSFLDSVVRVDDYLNMAEKMGYKQLGICDVGNLHGAYHFALEAQKRNIQP
IIGIELVFELESLPVSFSFIAKNTEGYKNLLKISSSHNYGRHRFSDIGSFLNNVVLVVPE
SYANLSALSQIQAEVYVGISPTGAEGTSHQFPYLPFQSVRYLSQADNESLEVLHAIRDLM
PYNQELTLSNDQLLQRPEIYEKLYAKNYPQALDNLEHLVANISYDFSGKLGLPQFDKQRD
AAELLRERAEVNLPAGEDYRARLEHELSVIHQMGFDDYFLIVADLLRYASENDIYCGMGR
GSAAGSLVAYTLGITHVDPVANNLFFERFLNPERVAMPDIDIDMPDTKRSELLAYMKRRY
GSDHVAQIVTFSTLGKRQALRDVGKAFGMNEAELSSLTRMLGQRFGSLRDEYEENPKLKA
EILRDSRLQKVFEIATRIEGLPRQTSTHASGVVLSQESLVNYVPLKPSDDLALTQYEAPD
VEAIGLLKIDFLGLRNLTIIERLRELVQKRKNVHIDPLHIDLEDEKTLALFRAGNTLGIF
QFENPQMRRFLRNLAPTKFEDIVDATSIFRPGPSQFIPQFVARRHGQEKVEVIDDTLTEI
LAPTYGIMIYQEQIMQVAQRFAGFSLGKADLLRRAISKKKGKEFEELQAEFLAGSLKLGH
TETQAMEIYRLIERFANYGFNRSHAYAYAALAFQIAYFKAHYPDEFYEVQLRDRKRERMI
QDALDNDFQMEHPFINRMPYHDRVENGKIALGLANVRTIPRDMAFWIVEHRPFSDLADLV
KRLPQNFQREDYLLPLVQIGAFDDQDMNRGKLAQNLSTLIDYSQNIQLDLFGASSLKFSF
QDAEDYLQSEKYEFEKQFLGVGITPHPLQALALKLKTNFTALTDLQKNKRATVLVELLAV
RTHRTKTGETMAFLSTTDSKENFDITLFPENYRRFMANLEKGKFYLFSGKVSERNDALQM
LADRVIEVEETERKLWLNLEDASHNTHISRILREFPGGIQVILHFADTKKTTQTQVYVEE
NDLLLNKLKTYVLNAVYK
NT seq
3117 nt
NT seq
+upstream
nt +downstream
nt
atgtttgcacaactcaacaccaaaacagagtacagttttttagacagtgttgtccgagta
gatgattatctgaatatggcagaaaaaatgggctataaacagctcggcatttgtgatgtt
gggaatctacatggtgcttatcactttgcgcttgaagcacaaaagagaaacatacagccc
attattggaattgagcttgtttttgagctggaaagtttacctgtatcctttagttttatt
gctaaaaatactgagggttataaaaatcttttaaaaatctcttccagtcataattacggg
cgccaccgtttttctgatattgggagtttcttaaataacgtcgttttagtggtacctgag
tcttatgcgaatctctctgccctttcacagattcaggcagaagtatatgttggcatctcg
cctacaggtgctgaaggcacttcgcatcagttcccctaccttcccttccagtctgtgcgc
tacttgtcacaggccgataatgaaagccttgaagttctacatgcgattcgtgatttaatg
ccttacaatcaagagttgactttgtcaaatgaccaacttttgcagcgaccagaaatttat
gaaaaattatatgctaagaattatcctcaagccttggataatctcgaacacttagttgca
aatatttcatatgactttagtggaaagttaggcttgcctcagtttgataaacaaagagat
gctgcagagctcctccgcgaaagagcagaagtcaatctgcctgcaggagaagactatcgt
gcacgtcttgaacatgaactttcggtcattcatcagatgggctttgatgattatttcctt
atcgttgcggacttattacgctatgcaagtgaaaatgacatctactgtggcatggggcgt
ggttctgccgctggttcattggtggcttatacgctagggattactcatgttgatccagta
gcaaataatctcttctttgaacgtttccttaatcctgagcgtgtggcaatgcccgatatt
gacattgatatgcccgataccaaacgttccgagttgcttgcctatatgaagcgacgctac
ggcagcgaccatgtggcgcagattgtgactttctcgaccttaggtaaacgacaagcttta
cgtgatgtagggaaggcttttgggatgaacgaagctgaactttcttctcttacacggatg
ctgggacaacgttttggttcccttcgtgatgaatacgaagaaaaccctaagcttaaggct
gaaattttacgtgacagtcgattgcagaaggtgtttgagatagctactcggattgaaggt
ttgccgcgtcagacatcaacacatgcttctggtgtggttttgagtcaagaatccttggtt
aattatgtgcctctcaagccatccgatgatttggctttgacacagtatgaggcgccggat
gtcgaagcaattggtcttttgaaaatcgactttttgggtttacgaaatttaacgatcatt
gagcgcttacgggaattagtacaaaagagaaaaaatgttcatatagatcctttgcacata
gatttagaagatgaaaaaacgttagcacttttccgtgcaggaaatactctgggcattttt
caatttgagaatccacagatgagacgcttcttgcgtaatttagctccaacaaagtttgag
gatattgttgatgcgacttctattttccgtccaggaccctcacagtttattccacagttt
gttgcccgacggcatggacaggaaaaagtagaagtcattgacgatacactgaccgaaata
ttagcaccaacctacggcattatgatttatcaggaacaaatcatgcaagtggcgcaacgc
tttgccggcttttctttgggtaaggcggacttgctccgccgtgcaatctcaaagaaaaaa
ggaaaagagtttgaagaactccaagctgaatttttagcggggagcttaaagttggggcat
actgaaacacaagctatggagatatatcgcctgattgaacgttttgctaattatggtttt
aatcgttctcatgcctatgcttatgctgctttagcttttcaaattgcttacttcaaagcg
cattatcccgatgaattttatgaggtacaactgcgtgaccgtaaaagagagcgcatgatt
caagacgctttggataatgattttcaaatggagcatcctttcatcaatcggatgccctat
catgacagagtagaaaatgggaaaattgctttaggtttagcaaatgtacggaccattcca
agagatatggcattctggattgttgaacataggccctttagtgatttagcagatttggta
aaaaggttaccacaaaatttccagagagaagattatttgcttcctcttgtgcagattgga
gcttttgatgatcaagatatgaacagagggaagctggctcaaaacttatcaaccctgatt
gattatagtcagaatatccaactggatctctttggtgcatcgtccttaaagttctctttt
caagacgcagaggattatctgcaatccgaaaaatacgaatttgaaaagcagtttttaggt
gtgggtattacaccacaccccttgcaagctttagcgcttaagctgaaaacaaattttaca
gcactgactgatttgcaaaaaaataagcgagcgactgttttagttgagttgctcgctgtg
cgtacccatcgtacaaagactggagagacgatggctttcctctcgacaaccgacagtaag
gaaaattttgacattacacttttcccagaaaattatcggcggtttatggcaaatctcgaa
aaaggaaaattttatttattctctggcaaagtttctgaaagaaatgatgctttacagatg
ctggctgatcgtgtcatcgaagtagaagagacagaacggaaactttggttgaatcttgaa
gatgcaagccataatacgcatatttcccgaattttacgggagttccctggaggaatacaa
gttattctgcattttgctgacacaaaaaaaaccacacagactcaagtctatgtggaagaa
aatgatttgcttttgaacaagttgaaaacctatgtcttgaacgctgtttataaatag
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