Lactococcus garvieae Lg2: LCGL_0390
Help
Entry
LCGL_0390 CDS
T01963
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
lgv
Lactococcus garvieae Lg2
Pathway
lgv03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lgv00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LCGL_0390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgv03021
]
LCGL_0390
03400 DNA repair and recombination proteins [BR:
lgv03400
]
LCGL_0390
Enzymes [BR:
lgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LCGL_0390
Transcription machinery [BR:
lgv03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LCGL_0390
DNA repair and recombination proteins [BR:
lgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LCGL_0390
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_2
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
DOCK-C2
Motif
Other DBs
NCBI-ProteinID:
BAK59850
UniProt:
F9VBZ9
LinkDB
All DBs
Position
401488..405078
Genome browser
AA seq
1196 aa
AA seq
DB search
MAGHDVKYGKHRTRRSFSRIKEVIGLPNLIEVQTASYQNFLDEGLANVFKEMFPIDNFAG
TMELEFVGYEMKAPKYTVDEARAHDANYSAPIHVTFRLVNKETGELKTQEVFFGDFPLMT
EMGTFINNGSERLIVSQLVRSPGSYFHLKTDKNGLESYGHTTIPNRGAWFELDTDAKGVG
YVRIDRTRKLTFTTMLRALGFGSDDEILELMGPSELLNTTLGKDVHKNPSDTRVEEALKD
IYDRLRPGEPKTADSSRGLLIARFFEPRRYDFAPVGRYKFNKKLALKNRILGLTLAEPIV
DPETGEILVESDTLVTRDVLDSIENLLDNGLNTTVYQPSDDAVIPEPIELQTLKVYSPKD
PERVVTLISNGQIPAENRVLMPADVIANINYWLGLSEGIGKVDDIDHLGNRRIRSVGELL
QNQVRIGLSRMERVIRERMSSSENENMTPQGLINIRPVTAAIKEFFGSSQLSQFMDQHNP
LSELSHKRRFSALGPGGISRDRASYEVRDVHYTHYGRMCPIETPEGPNIGLINNLSSYAK
INEYGFIMSPYRRIDRATGTVTDEVEYLTADEEDNYTVAQANSPLTDDNKFVNDTVMARH
VGNNIEVDASTADYMDVSPKQVIAVAAACIPFLENDDSNRALMGANMQRQAVPLIDPHAP
WIGTGMEHQTARDSGAAVIAKHDGTVEYVDADEIRVRRTSGELDIYNIMKYRRSNSGTSY
NQRPLAELGDKVEAGDIIGDGPSMENGEMALGQNPLVAYMTWEGYNFEDAIIMSERLIKD
DVYTSIAIEEYESETRDTKLGPEEITREIPNIGDEALKNLDEDGIIRIGAEVEDGDLLVG
KVTPKGETDPTPEERLLRAIFGEKAREVRDTSLRVPHGGGGIVHDVRVFTRENGDELPSG
VNKLVRVFISQKRKIHVGDKMAGRHGNKGVVSNIVPVEDMPYLPDGTPIDIMLNPLGVPS
RMNIGQVMELHLGMAARTLGIHIASPVFDGASDEDIWNTVKEAGMAEDAKTVLYDGRTGE
AFDNRISVGVMYMIKLHHMVDDKLHARSVGPYSLVTQQPLGGKAQFGGQRFGEMEVWALE
AYGAANVLQEILTYKSDDVIGRTRAYEAIVKGERIPKPGLPESFRVLVKELQALGMDLKV
LDGEKNVLDLRELDDEIEVRQENIDITPEMLEAQEQIVTEAVETEQALISEAKEEK
NT seq
3591 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacatgacgtaaaatacggtaaacaccgtacaagacgcagtttttcacgaatc
aaagaagtaattggtttgccgaacttgatcgaagttcaaacagcaagttaccaaaacttc
cttgacgaaggtttggctaacgtcttcaaagaaatgtttccaattgacaactttgcgggc
acaatggagcttgaatttgttggatatgaaatgaaagcccctaaatacactgtggatgaa
gcccgtgctcacgatgcaaactattctgcaccgattcatgtgactttccgccttgtaaat
aaagaaacaggcgaattgaaaacacaagaagttttcttcggtgatttcccacttatgact
gagatgggtaccttcatcaataacggttctgaacgtttgatcgttagccagttggtacgt
agcccaggttcatacttccaccttaaaacagataaaaatggtctggaatcttatggtcat
acaacgattcctaaccgtggtgcgtggtttgaattagatacagacgctaaaggtgttggt
tatgtacgtatcgaccgtacacgtaagttaacatttacaacaatgttgcgtgcacttggt
tttggtagtgacgatgaaattcttgaacttatgggaccaagcgaactcctcaatacaaca
ttgggcaaagatgttcacaaaaacccatcagacactcgtgttgaagaagcacttaaagat
atctatgaccgcctccgtcctggtgagcctaaaacagcggacagctctcgtggactttta
attgcacgtttctttgagccacgtcgctacgactttgcacctgtaggtcgctataaattt
aataagaagcttgcgcttaaaaaccgtatcctcggtttgactttggcagagccaatcgtt
gaccctgaaacaggcgaaattctcgttgaatcagatacactcgtaacacgtgacgtttta
gattctatcgaaaaccttttggataatgggctcaatacaacagtttatcaaccctctgac
gatgctgttattcctgaaccaattgaacttcaaaccttgaaagtttactctccaaaagat
ccagaacgtgtcgtaacattgatttctaacggtcaaattcctgcagaaaatcgtgtattg
atgccagcagacgtgattgctaacatcaactactggttaggtctttctgaaggcattggt
aaagttgacgatatcgaccacttaggaaaccgtcgtatccgttcagttggtgaattgctt
caaaaccaagtgcgtatcggtctttcacgtatggaacgtgttatccgtgaacgtatgtca
tcttctgaaaatgaaaatatgacacctcaaggattgattaacattcgtcctgtaacagct
gcaatcaaagaattctttggttcttcacagttgtcacaatttatggaccaacacaatcct
ttgtcagagctttcacacaaacgccgtttctctgccttaggtcctggtggtatctcacgt
gaccgtgcttcatatgaagtacgtgacgtacactacactcactatggccgtatgtgtccg
attgaaacacctgagggtccaaatatcgggttgatcaacaacttgtcatcttatgccaaa
atcaatgaatatggtttcatcatgtcaccataccgtcgtattgatcgtgcaacgggaaca
gttacggatgaagtagagtatctaacagctgacgaagaggacaactatacagttgcccaa
gctaactcaccattgactgatgacaacaaatttgtcaacgacactgtaatggcccgtcac
gtgggtaacaatattgaagttgatgcttcaactgcggactatatggacgtttcacctaaa
caggttatcgccgtagcagccgcttgtattcctttcttggaaaatgatgactccaaccgt
gcccttatgggtgccaatatgcaacgtcaagccgttccattgattgatccacatgcacct
tggattggtacaggtatggaacatcaaacagcacgtgactcaggtgctgctgtgatcgct
aaacatgacggtactgttgaatatgtagatgctgacgaaatccgtgtacgtcgtacatca
ggtgagcttgatatctataacatcatgaaataccgccgttcaaactctggaacttcatat
aaccaacgtccacttgcggaacttggtgataaggttgaagcaggcgacatcattggtgat
ggcccatcaatggagaatggggaaatggcgcttggtcaaaacccactcgttgcttatatg
acttgggaaggttataacttcgaggatgccatcatcatgtctgaacgtttgattaaagat
gacgtttatacatctattgctatcgaagaatatgaatcagaaacacgcgatacaaagctt
ggccctgaagaaattacacgcgaaattccaaatattggtgatgaagccctcaaaaacttg
gacgaagacggtatcatccgtattggtgctgaggttgaagatggagacttgctcgttggt
aaagtcacaccaaaaggtgaaactgatccaacacctgaagaacgtcttcttcgtgccatc
tttggtgaaaaagcgcgtgaagttcgtgatacatcactccgtgtaccacacggaggtggc
ggtatcgtccacgatgtgcgtgtctttacacgtgaaaatggtgatgagttgccatcaggt
gtgaacaagttggtccgtgtcttcatctcacaaaaacgtaaaatccacgttggggataag
atggccggacgtcacggtaacaagggtgtcgtttcaaatatcgttcctgtagaggatatg
ccttacttaccagacggtacaccaatcgatatcatgttgaatccattgggtgtcccttct
cgtatgaatatcggacaagttatggagcttcacttaggtatggctgcacgtacattgggt
attcacattgcatcaccggtcttcgatggtgcaagcgatgaagatatctggaacacagtg
aaggaagctgggatggctgaagatgccaaaacagtactttatgacggacgtacaggtgaa
gcctttgataaccgtatctctgtcggtgtcatgtacatgatcaaacttcaccacatggtt
gatgataaacttcacgcacgtagtgttggtccttactcactcgttacacaacaaccgctc
ggtggtaaagcacagttcggtggacaacgtttcggggaaatggaagtttgggcccttgaa
gcatatggtgctgcgaatgttctccaagaaatcttgacttacaagtcagatgatgtgatt
ggacgtacccgtgcctatgaagcgatcgtgaaaggtgaacgtattcctaaaccaggtctt
cctgaatcattccgtgtccttgtaaaagaattgcaagcacttggtatggatcttaaagtc
ctcgatggtgagaaaaacgtccttgatcttcgtgaactggatgatgaaatcgaagttcgt
caagaaaatattgacattacgccagaaatgcttgaagctcaggaacaaattgttactgaa
gcagtggaaactgaacaagcattgattagcgaagcaaaagaagaaaaataa
DBGET
integrated database retrieval system
