Lactococcus garvieae Lg2: LCGL_1850
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Entry
LCGL_1850 CDS
T01963
Name
(GenBank) DNA polymerase III alpha subunit
KO
K03763
DNA polymerase III subunit alpha, Gram-positive type [EC:
2.7.7.7
]
Organism
lgv
Lactococcus garvieae Lg2
Pathway
lgv03030
DNA replication
lgv03430
Mismatch repair
lgv03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgv00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LCGL_1850
03430 Mismatch repair
LCGL_1850
03440 Homologous recombination
LCGL_1850
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgv03032
]
LCGL_1850
03400 DNA repair and recombination proteins [BR:
lgv03400
]
LCGL_1850
Enzymes [BR:
lgv01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LCGL_1850
DNA replication proteins [BR:
lgv03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LCGL_1850
DNA repair and recombination proteins [BR:
lgv03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LCGL_1850
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
RNase_T
PHP
DNA_pol3_finger
DNA_pol3_a_NI
DNA_pol3_a_NII
HHH_6
RNase_H_2
DEDDh_C
Zn-ribbon_8
ZapA
Motif
Other DBs
NCBI-ProteinID:
BAK61310
UniProt:
F9VG59
LinkDB
All DBs
Position
complement(1825063..1829946)
Genome browser
AA seq
1627 aa
AA seq
DB search
MENLFEKLMDQIKMPNQIRESALFSSADIENVEVHTERKLWKFQLKFEKILPVEQWKVLS
GLIESAFSTIAETELSITVDQPEFDEAMLNDYYQLALTLPDLADTAFANIFKKYQIEQRG
VQINLLVEDNPQLDHFVKKDFPILEQKLKDFGFGTLTIRPVVDEKLTLEKREAHERKVHN
MLAAESASQQQISELKKQRTDESSAKTEKAPEKIDTALAEGISFGRKINGTSPVTSMSFI
AGEGSGVVFEGYVFDAHHREFASNGTGKVNHVLEMKIADETSIFQVVKWGRKDNEIAQFD
TIVEKVKAANTSEDGTIQFDQGIWLRVRGNIAHDVYKDDLVMTANDVVEISKKEDCSRVA
AQISAVKSDKIQIGREIKNSEPITPMRSVSEFSTHGALVFEGYIFKSELREIKSRKTGNI
SHLLEIEMTDYTSSFYISKWVRGDEEIAVAKQLTGIWARVRGTVQHDDYKKDLVLQMSDL
QEIPTQRVREDKAAEGDKRVEFHSHTNMSTMDAMPPASKLVAQAAKFGHKAIAITDHAGL
QAYPEAHQAGKKHGVKIIYGVEANLVEDKIPIVFNEEDVNMYESTYVVFDVETTGLSAVH
NDLIQIAGTKMHKGNPIGEFDEFINPGYAISDFTTELTGITQDHLKNAKPLYEVLKAFQD
FCQGSILVAHNATFDVGFMNMNYQRNGLPIIKQPVVDTLEFARNLYPEMKRFGLGQLTKK
FQIGLEHHHMANYDAEATGRLLFVFLNEVRDRFGWTSLLDLNDKLVAEDSYKKVRPKHVT
LYAQTQAGLKNLFKLVSYSNVKYLAGVPRIPRSVLQEHREGIIVGSACKSGEVFDAITNK
TFEEALEIAKFYDFIEVMPPALYHSLVVGGNFKNEKELQQTLKDLIKLGKKLGKPVLATG
DAHYLNPEDAINREIIIRSLGQGAEINWNQGRGEHAKPLPLPEAHFRTTDEMLEEFSFLD
EATAREIVITNTQKMAEQFEELTPVRDDLYTPKMTFEGGESSEERITRLTYEKAHEWYGN
PLPDIVDARLEKELRSIIGNGFSVVYIISQELVRRSNERGYIVGSRGSVGSSLVATMIGI
TEVNPLAPHYRCPECQYFECYDDGSYGSGYDMPDKNCPKCGHKLVKDGHDIPFETFLGFK
GDKVPDIDLNFSGDDQPLAHLDVRDIFGEDYAFRAGTIGTVAEKTAFGFVKGYERDYNQF
YSNAEIDRLAMTSTGVKRTTGQHPGGIIVIPNYMDVYDFTPVQYPADDVRAEWQTTHFDF
HAIHDNILKLDILGHDDPTMIRKLQSLSGIVPQDIPMDDEEVMKLFTGTESLGITEEQLG
AKLGTLGIPEMGTFTSMNMIAEAKPKTFADLLQISGLSHGTDVWAGNAQELIRSGIADLS
SVIGCRDDIMVYLIHAGLDESMAFNIMERVRKGMWSKIGAEERETYVNAMREHGVPDWYI
ESCSKIKYMFPKAHAAAYIMMALRVAYFKVHKPILYYCAWFSIRATTFDVATMGAGLEAV
KAKMKEIRDKGFDATNTEVSLMTTLELCNEMLERGYKFGKIDLYRSEATEFVIDGDTLIP
PFITMDSLGENVAKQLVEARKEGEFLSIMELRKRGGVSQTVVDNMKSMGILQGMPEDNQL
SLFEDLF
NT seq
4884 nt
NT seq
+upstream
nt +downstream
nt
atggaaaatctttttgaaaaactgatggatcaaataaaaatgccaaaccaaattcgcgaa
tcggctcttttttcaagtgcagacattgaaaatgtagaagtacatacagaacgaaagctg
tggaaattccaattaaaatttgagaaaatcttgccagttgaacagtggaaggttttgtct
ggattgattgagtctgctttttcaactatcgctgagacggaactttcgataacggttgac
caacctgaatttgatgaggcaatgctcaacgattattatcagctggcattgactttacca
gacttagcagatacagcttttgcgaatatttttaaaaaatatcagatagagcaacgaggc
gttcagatcaatcttttggttgaagacaatcctcagttggatcattttgtaaaaaaagac
ttccctatcttagaacaaaagttgaaagattttggctttggaacacttactattcgtcct
gttgttgacgaaaagttaaccctggaaaaacgagaagcacatgaacgtaaagtgcataac
atgttggccgcagagtccgcatcgcaacagcagataagtgaactcaaaaagcagcgtacg
gatgaatctagcgctaaaaccgaaaaagcacctgaaaaaattgatacagccctggcagaa
ggcatttcatttggacgtaaaataaatggcacaagccccgtgacttcgatgagctttatc
gctggtgagggaagtggcgttgtttttgaaggctatgtctttgatgcgcatcaccgtgag
tttgccagcaatggtacaggcaaggttaatcatgttttggagatgaagattgcggatgaa
acttccatcttccaagtggttaaatggggacgcaaagacaatgaaatagctcaatttgac
accatcgtggagaaagttaaggctgccaatacaagtgaagatggtacgattcaatttgat
cagggcatctggctgcgtgtgcgtggaaatattgcacatgatgtttataaagacgatctc
gtgatgaccgcaaatgatgtcgttgagatttctaaaaaagaagattgtagccgagttgcg
gcacaaattagtgctgtaaaatcagataaaattcagatagggcgcgaaattaagaattct
gagccaatcacccccatgcgttcggtcagtgaattttctactcatggtgctttggtgttt
gaaggttatattttcaagagcgagttacgcgaaattaaatcacgcaaaacaggaaatatt
agccacctgctagagattgaaatgacggactatacatctagcttttacatctcaaaatgg
gtccgtggggatgaagaaattgctgtggctaaacagcttacaggtatttgggcgcgagta
cgcggcacagtgcagcatgatgactataaaaaagatcttgtcctccagatgagtgactta
caagagataccgacacaaagagtgcgagaagacaaggcagccgaaggagacaaacgtgtg
gaatttcatagccatacaaatatgtcgaccatggatgcgatgccacctgcaagtaagctt
gtcgcccaagctgcgaagtttggtcataaagcaattgctattacagatcacgcgggtctt
caagcctatccggaagcccatcaagccggaaaaaaacacggtgtaaaaattatctatggt
gtagaggcgaatctggtagaagataagattcctatcgtgttcaatgaagaagacgtcaac
atgtatgagtcaacttatgttgtctttgacgtggaaacgacaggattatctgctgttcat
aacgatctgattcaaattgccggaacgaagatgcacaagggcaatcccattggggagttt
gatgagtttattaatcctggttatgccattagtgattttacaacggaattaacaggtatt
acacaagatcatttaaaaaatgcaaagccgctgtatgaggttttgaaagcttttcaagac
ttttgtcaaggcagtatcttggttgcccataatgccacttttgacgtcggctttatgaat
atgaactatcagcgaaatggcttgccaatcattaagcaaccggtagtggatactttggaa
ttcgcccgtaatctgtacccagagatgaaacgttttggtttaggccaattaacgaaaaag
tttcaaattggtttagaacatcaccatatggccaactatgacgcagaagctacggggcgt
ctattgtttgtattccttaacgaagttcgtgatcgttttgggtggacatccttgcttgac
ttgaacgataaacttgtagcggaagattcttataaaaaagttcgtccaaagcacgtcaca
ctctatgctcaaacgcaagcagggttgaagaatttatttaaacttgtaagttattctaat
gttaagtatcttgctggtgtaccacgtattccgcgttctgttttgcaagagcatagagaa
ggtatcatcgttgggtcagcctgcaaatcaggtgaagtttttgatgccataacaaataaa
acctttgaagaagcattagagattgcgaagttttatgactttattgaagttatgccgcca
gcgctgtatcactctcttgttgttggtggcaatttcaagaatgaaaaagagctccaacaa
acgctgaaggacttgattaagctcggcaagaaattaggcaaacccgtcttagctactgga
gatgctcactatcttaacccagaagatgcgataaatcgtgagattattatacgttcgctg
ggtcaaggggcagaaattaactggaaccaaggccgaggcgagcatgcaaaacctctacca
ttgcccgaagcccatttccgtacgacagacgaaatgctggaggaattcagtttcttagat
gaagctacagcgcgtgaaattgttatcaccaatacgcaaaaaatggcagagcagtttgaa
gaattaacgcctgtaagagatgacctttatacaccgaagatgacctttgaaggtggagaa
agttcggaggagcgcatcacgcgtttgacttatgagaaagcgcacgagtggtacggtaat
cctctaccagatattgtagatgcacgtttggaaaaagagctgcgttctattatagggaat
ggattttccgtggtttatattatttcgcaagaacttgtacggcggtcaaatgaacgtggt
tatatagtaggttctcgtggatcggtgggttcatcacttgtggcaacaatgattggtatt
accgaggtcaatcctcttgcaccgcattatcgctgcccagaatgtcaatattttgaatgc
tatgacgatgggagttatggttcaggctatgatatgcctgacaaaaattgcccaaaatgt
ggacataagttggttaaagacggtcatgatattccctttgaaactttcctaggtttcaag
ggggacaaagtacccgatattgacttgaacttttcaggagatgatcaacctttggcccat
ttggatgtccgggatatttttggggaagattatgcttttcgcgcgggaactattggtacg
gtagccgaaaaaacagcttttggttttgtcaaaggttatgaacgagattacaaccagttt
tatagcaatgccgaaattgatcgtttggccatgacttcaacaggggttaaacgtacaact
ggacaacacccgggcggcattatcgttattccaaactatatggacgtctacgattttaca
cccgttcaatacccagctgatgatgtgcgtgcggagtggcaaacgacccactttgatttc
catgcgattcatgacaacatcttaaaacttgatattcttggacatgatgatccgacgatg
attcgaaaactccaaagtttatcggggattgtcccacaagatattcctatggatgatgag
gaagtaatgaaactcttcacaggtacagaatctttggggattacggaggaacaactgggc
gcaaaacttggaacgctaggtattcctgagatgggaaccttcacttcaatgaacatgatt
gctgaagccaaacctaaaacttttgcggatttactgcaaatttcaggactttcacatggt
acggacgtatgggcaggtaatgcccaagaattgattcgttccggtattgctgacttgtcc
agcgttatcggttgtcgggatgatattatggtttacctgatacatgctggcttagatgaa
tccatggcctttaatattatggaacgtgtacgtaaagggatgtggagcaagattggggca
gaagaaagagaaacctatgttaatgcgatgcgtgagcatggtgttccagattggtatata
gaatcttgttcgaaaatcaagtatatgttcccgaaagcccatgcagcggcctatattatg
atggcccttcgtgtcgcttatttcaaggtccataaaccaattctctactattgtgcgtgg
ttttctattcgtgcaacaacatttgatgttgcgacaatgggggctggcttagaggcagtc
aaggcgaagatgaaggagattcgtgataaaggattcgatgcaacaaacactgaggtctct
ttaatgacaacgctcgagctttgtaatgaaatgcttgaacgaggctataaatttggaaaa
attgacctttaccgcagtgaagctacagaatttgttattgatggcgatacattgattcca
ccctttattaccatggacagcttgggcgaaaacgtggcaaaacaacttgttgaagcccgt
aaagaaggagagttcttgagtattatggaacttcgtaaacgaggtggcgtgtcacaaacg
gttgttgacaatatgaaatcgatgggaattctccaaggaatgccagaagataatcaatta
agtctctttgaggatctcttttaa
DBGET
integrated database retrieval system
