Lysinibacillus varians: T479_00030
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Entry
T479_00030 CDS
T03062
Name
(GenBank) DNA gyrase subunit A
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lgy
Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgy03032
]
T479_00030
03400 DNA repair and recombination proteins [BR:
lgy03400
]
T479_00030
Enzymes [BR:
lgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
T479_00030
DNA replication proteins [BR:
lgy03032
]
Prokaryotic type
DNA Topoisomerases
T479_00030
DNA repair and recombination proteins [BR:
lgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
T479_00030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
WDR55
Motif
Other DBs
NCBI-ProteinID:
AHN20054
LinkDB
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Position
6597..9065
Genome browser
AA seq
822 aa
AA seq
DB search
MSEQERSGVKGVNITEEIETSFLDYAMSVIVSRALPDVRDGLKPVHRRILYGMQELGNTA
DKAYKKSARIVGDVMGKYHPHGDSSIYDAMVRMAQDFSYRYMLVDGHGNFGSVDGDGAAA
MRYTESRMSRIAMEMLRDINKNTIDYTDNYDGSEKEPVVLPSRYPNLLVNGAAGIAVGMA
TNIPPHNLGETIDGVLALSENPAITTEELMEIIPGPDFPTGGLILGRSGIRRAYETGRGS
IIIRAKVEIEQKSNGKETILIHELPYQVNKAKLIEKIAELVRDKKIDGITNLRDESDRRG
MRVVIEIRKDANANVVLNNLYKQTAMQSSFGVNMLSLVNGQPKVMGIKEMLYHYLEHQKV
IIRRRTEFDLKKAEDRAHILEGLRIALDHIDEIIAIIRGSRSGEEAKPQLMERFNLSERQ
AQAILDMRLVRLSGLEREKIEAEYQELQVLIAELKAILADEAKIVEIIRTEILELKERFN
DARRTEITSGGMEMIEDEDLIPVENSVVTLTHNGYIKRLAANTYRSQKRGGRGVQGMGTN
EDDFVEHLMNTSTHDTILFFTSKGKVFRAKGYEIPEYGRTAKGLPIVNLLNIDKGEKVTA
MIRVDSFDKDAYFIFTTKTGISKRTPVSQFANIRTNGLIAISLREDDDLIAVRLTDGMKQ
VIIGTRDGMLVRFQEDDIRSMGRTAGGVRGIKLREGDEVVGMEIVEPGQEILVVTEKGYG
KRTTEEEYRLQSRGGVGLKTIQITDKNGPMVAVKTVDGSEDLMLITINGMLIRMDVNDIS
LIGRSTQGVRLIRLGDDELVATVAKVEKEDEEATDENEEIEE
NT seq
2469 nt
NT seq
+upstream
nt +downstream
nt
ttgtcagaacaagaacgctccggtgttaaaggagttaatataacagaagaaatcgaaaca
tccttcctcgattatgcaatgagtgtaatcgtttcgcgtgcattaccagatgtacgcgat
ggattaaagccagttcatcgtcgtattttatacggcatgcaagagttaggaaatacagca
gataaagcgtacaaaaaatcagcacgtatcgttggggatgtaatgggtaagtaccatcca
catggtgactcttcaatttacgatgccatggtacgtatggcacaagattttagttatcgt
tacatgcttgttgatggtcacggaaactttggttctgttgatggcgacggagcagctgcg
atgcgttatacagaatcgcgtatgtctcgtattgcaatggaaatgcttcgagatattaat
aaaaacacaattgactatactgataactatgatggctctgaaaaagaaccggtcgtttta
ccaagtcgctatccaaacttattagtaaatggagcggcaggaattgcggttggtatggca
acaaacattcctccacataacctaggggaaacgattgatggagtgttagcactatctgaa
aatcctgcaattactacggaagaattgatggaaattattccaggaccggatttcccaact
ggtggattgattttaggacgcagtggtattcgccgtgcctatgaaacaggccgtggttcc
attattattcgagctaaagtagaaatcgaacaaaagtcaaacggtaaagaaacaattctt
attcatgaattaccttaccaagtaaataaggcaaaattaattgaaaagattgctgagcta
gttcgcgataaaaaaatcgatggcattaccaatctacgagatgaatctgaccgccgtggt
atgcgtgtagttattgaaatacgaaaagatgccaatgcaaatgtcgtgttaaataatctt
tataagcaaacagcgatgcaatcaagctttggtgttaatatgctgtctttagtaaatgga
cagccaaaagtaatgggcattaaagagatgctgtatcattatttagagcatcaaaaagtc
atcattcgccgccgtactgaattcgatttaaagaaagcagaagaccgtgctcatatttta
gagggcttacgaattgccctagatcatattgatgaaattattgcgattatccgcggttct
cgtagtggtgaggaagctaaaccgcaattaatggaacggtttaatttatctgaacgtcaa
gcccaagcaattttagatatgcgtttagtacgtttaagtggcttagaacgagaaaaaatt
gaagcagaatatcaagagttacaagtgctaattgctgaattaaaagcaatcttagccgat
gaagctaaaattgttgagattattcgcactgaaatattagaactgaaagagcgcttcaat
gatgcccgtcgtacagagattacatctggcggtatggaaatgattgaggatgaggattta
attcctgtagaaaattcagttgttacgttaacgcataatggctatattaagcgcttagct
gccaatacatatcgcagtcaaaagcgcggtggtcgtggtgtacaaggaatgggaactaat
gaggatgacttcgtcgagcaccttatgaatacatctacgcacgatactatattattcttc
acgtctaaggggaaagtattccgtgctaaaggttacgaaattccagagtacggtcgcacg
gcgaaaggtttaccaatcgttaacttactgaatatcgataaaggtgagaaagttacggca
atgattcgtgttgattcatttgacaaggatgcttactttatctttacaacgaaaacaggt
atttcaaaacgtacacctgtatctcaatttgcaaatatccgtacgaatggcttaattgct
attagtttacgagaagatgatgatttaattgctgttcgtttaacggatggtatgaagcaa
gtgattatcggaacgcgtgatggtatgcttgttcgtttccaagaggatgatatccgttca
atgggacgtacagcaggtggggtacgtggtattaagctacgagaaggcgatgaagtagtt
ggtatggaaatcgtcgaacctggacaagaaattttagtcgttaccgaaaaaggctatggt
aagcgtacaactgaagaggagtatcgtttacaaagtcgtggtggcgttggtttaaaaaca
attcaaattaccgataaaaatggtcctatggtggctgttaaaactgttgatggttctgaa
gatttaatgcttattacaatcaacggaatgctgatacgtatggatgtcaatgatatttca
ttaattggtcgtagtactcaaggtgttcgtttaattcgtttaggggatgacgaacttgtt
gcaactgttgcaaaagttgaaaaagaagacgaagaggccactgatgaaaatgaggaaata
gaagaataa
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