Lysinibacillus varians: T479_02675
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Entry
T479_02675 CDS
T03062
Name
(GenBank) DNA-directed RNA polymerase subunit delta
KO
K03048
DNA-directed RNA polymerase subunit delta
Organism
lgy
Lysinibacillus varians
Pathway
lgy03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
T479_02675
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lgy03021
]
T479_02675
03400 DNA repair and recombination proteins [BR:
lgy03400
]
T479_02675
Transcription machinery [BR:
lgy03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
T479_02675
DNA repair and recombination proteins [BR:
lgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
T479_02675
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HARE-HTH
TPR_20
Motif
Other DBs
NCBI-ProteinID:
AHN20483
LinkDB
All DBs
Position
554057..554584
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AA seq
175 aa
AA seq
DB search
MNFREMTKEQLAEESLINLAYAILTEKRASVSFNDLLTIIKELVGYSDEEIKSRLLQFYT
DMNIDGRFLFNQETGWGLREWFKVEQIEEETAPSVKTHKKKSKAALDDEDDIEEDLDEEE
IDFDEDYEEFVEEEIDEEKEDIDFDEEDIEDIDEEIDEDFIEDDEEFEEEEEEEV
NT seq
528 nt
NT seq
+upstream
nt +downstream
nt
ttgaattttcgtgaaatgacaaaggaacaattagcggaagaatcgttaattaacttagct
tatgcaattttaacagaaaaacgtgcttcagtgtcatttaatgacctgcttacaattatt
aaagagcttgttggctatagcgatgaagaaataaaatcacgcttactacaattttacaca
gatatgaacattgatggacgtttcttattcaatcaagaaactggttggggcttacgtgaa
tggtttaaagttgaacaaatcgaagaagaaacagctccttctgtgaaaacacataagaaa
aaatctaaagctgctcttgatgatgaagatgatatagaggaagatttagacgaagaagaa
attgacttcgatgaagactatgaagaatttgttgaagaagaaatcgatgaagaaaaagaa
gatatcgactttgatgaagaagatatagaagatattgatgaagaaatagatgaagatttc
attgaagatgatgaagaatttgaagaagaagaagaggaagaagtgtaa
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