Lysinibacillus varians: T479_04470
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Entry
T479_04470 CDS
T03062
Name
(GenBank) penicillin-binding protein 2B
KO
K08724
penicillin-binding protein 2B
Organism
lgy
Lysinibacillus varians
Pathway
lgy00550
Peptidoglycan biosynthesis
lgy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T479_04470
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
T479_04470
Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
Peptidoglycan biosynthesis and degradation
DD-Transpeptidase (Class B PBP)
T479_04470
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transpeptidase
PBP_dimer
PASTA
Motif
Other DBs
NCBI-ProteinID:
AHN20804
LinkDB
All DBs
Position
944990..947119
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AA seq
709 aa
AA seq
DB search
MITLQATGEAEGQALAAKAAAKYNKESAITANRGKIFDRNGQVIAEDTLSYRLIAVVSDK
ATTDEKRPHHVVDPEKTAEILSEYIKMDKEDIYKRLTKLRSDGTLPYQVEFGVAGRGINH
EVMSKIKEEKLPGILFVSDLKRYYPNGVFASHLIGFALKQDNKDGTVTTKGKMGLELTYD
KELTGVNGKVKYQTDAFSYLLPNSEKMVTPAKDGDNIFLTIDKTIQSFVEDAMTQVEKEY
NPESMIVVVAEPKTGKILAMSQRPTFNPDTRESTNMKWLNAVIEETIEPGSTMKTFTLAS
AIDTGKWLPSEKYMSGQYTVYDRTIRDHNQVGWGKISYLQGFQRSSNTAMAHLLKSIGDD
VFVDYLGKFGFGKKTGIDLPNEATGTILSKYPIQRVTTTYGQGSTVTPIQLIQAMTAIAN
DGKMMQPYVIDKIVDSSTGEIIQQHEPEEKGQPVSADTAKQVREILASTLTSEFGTAKDF
ILDEYQVAGKTGTAQIPKANGTYSWGANQFLYSFLGMAPYDDPQLIMYVSVEKPKLKGEL
GSVPVSKIFKPVMQNSLKHLNISPADVQHVNHTAIQDYTGQHAEAIQVELANDGLNPVIV
GAGGEVLEQYPKSGQKLVKGSFVFLKTAGDIALPNFTNWSLRNLLVFKSMSGLEIEVVGE
GFAVSQSVSAGTVISDSAPIVVKLKTPAESFVQDVEAPSEGEIEQVDDE
NT seq
2130 nt
NT seq
+upstream
nt +downstream
nt
atgattacattacaggcgacaggtgaagcagaaggacaagcgctcgctgcaaaagcagcg
gctaaatataacaaagaaagtgcaatcacagcaaaccgaggcaaaatttttgatagaaat
ggacaagttatagctgaagatacgcttagttatcgactaattgccgtagttagtgataag
gctactacagatgaaaagagaccccatcatgttgtagaccctgaaaaaacggcagaaatc
ttaagtgaatatatcaaaatggataaagaggatatttataaaaggctaacgaagctccgc
agtgatggaactttgccatatcaggtggagtttggtgtggcaggtagaggcattaaccat
gaagtcatgagcaaaattaaagaagaaaaattacctgggatattgtttgttagcgattta
aaacgctattatccgaatggtgtttttgcttcacatttaattggttttgctctgaaacag
gacaataaggacggcaccgtaacgacgaaagggaaaatggggttagaacttacctatgat
aaggagttaacgggtgttaatggcaaagtaaaatatcaaaccgatgcctttagttactta
ttaccaaacagtgaaaaaatggtgacacctgcaaaagatggcgataatatctttttaaca
attgataagacaattcaaagtttcgtagaggatgctatgacgcaagttgagaaagaatat
aatcccgagtcaatgattgtcgttgtagctgaaccgaaaacagggaaaatattagcgatg
tcacagcgtccaacttttaatccagatacacgtgaaagtacgaatatgaaatggcttaat
gctgtgattgaagaaaccattgaaccaggttcgacgatgaagacgttcacacttgcttct
gccatcgatacaggtaaatggttaccatctgaaaaatatatgtctgggcaatatacagtg
tatgaccgtacaattcgagatcataaccaagtaggttgggggaaaatctcgtatttacaa
ggtttccaacgttcatctaatacagcaatggcccatttattaaaaagcattggtgatgat
gtatttgttgattacttaggtaaattcggttttggtaagaaaacaggcattgatttaccg
aatgaagcaacgggtacgattttatcgaaatatcctattcaacgcgtgacaacgacttat
ggacaaggttcaaccgtgacaccgatacagctaatccaagcgatgacagcgattgcgaat
gacggtaagatgatgcagccgtatgttatcgataagattgtagattcatcaactggtgaa
attatccaacaacatgagccggaagaaaaaggtcaaccagtgtcagcagatacagcaaaa
caagtacgtgaaattcttgcttcgacattaacatcagagtttgggacagcgaaggacttt
atcctcgatgaataccaagtagctggtaaaacgggtacagcccagataccaaaggcaaac
ggaacctattcatggggagccaatcagttcttgtattcattcctaggaatggcgccatat
gatgatccgcaactcattatgtatgtgtcggtggaaaaaccaaagcttaaaggtgagcta
ggttctgtaccagtttccaaaatatttaagccagttatgcaaaatagtttaaaacattta
aatattagccctgctgatgttcagcatgtcaatcatacagctatacaagattatactggt
cagcatgcagaagctattcaagttgaactggcaaacgatggattaaatccagtaattgtt
ggagctggaggagaagttttagaacaatatccgaaaagtggacaaaaacttgtcaaaggt
agttttgtctttttgaaaacagcaggggatattgcattgccaaactttacaaactggtca
ttacgtaatctattagtttttaaatccatgtcaggtctagaaattgaagttgttggagag
ggctttgcagtcagtcaaagtgtatctgcaggtaccgtaatttcagatagtgcgccaatt
gtagtgaagttaaaaacacctgctgaaagctttgtacaagatgttgaagcgccgtctgaa
ggagaaattgaacaggtagatgatgaatag
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