Lysinibacillus varians: T479_04485
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Entry
T479_04485 CDS
T03062
Symbol
murD
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase
KO
K01925
UDP-N-acetylmuramoylalanine--D-glutamate ligase [EC:
6.3.2.9
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00470
D-Amino acid metabolism
lgy00550
Peptidoglycan biosynthesis
lgy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00470 D-Amino acid metabolism
T479_04485 (murD)
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T479_04485 (murD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
T479_04485 (murD)
Enzymes [BR:
lgy01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.9 UDP-N-acetylmuramoyl-L-alanine---D-glutamate ligase
T479_04485 (murD)
Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
Precursor biosynthesis
Amino acid ligase
T479_04485 (murD)
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
MurD-like_N
2-Hacid_dh_C
AlaDh_PNT_C
Motif
Other DBs
NCBI-ProteinID:
AHN20807
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Position
950191..951540
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AA seq
449 aa
AA seq
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MREYTDLQHKKVLVLGLAKSGVAAAEILHELGAFVTVNDSKPFDESPDAQGLLQKGITVI
CGRHPEDLLDEGFEIVVKNPGIPYSNNIVADAIKREIPVWTEIELAYLISDAPFVGITGS
NGKTTTTTLIFEMLENGAKKPLIAGNIGTVACGVAKEAQEDNVIVTELSSFQLMGTKTFK
PKISILTNLYDAHLDYHGTFDNYAEAKFGVTRNQDETDYFIFNADQPIVVGYAAKSNAQK
VPFSSKGRTEQGISADDTTIYWQGEPFMDRAIIALPGKHNLENILAAVAACILIGCEKAK
MEEVLAKFGGVRHRTQFVREWNGRKIYNDSKATNCLATKSALDAFQAPVILLAGGLDRGH
SFEELRPCMGHVKGVVAFGETGLRFVEFAKSCGVSQTVIAQNVEDAVHYAAPMSAEGDVI
LLSPACASWDQYDSFEIRGDVFIDAVMKL
NT seq
1350 nt
NT seq
+upstream
nt +downstream
nt
atgagagagtatacagatttacaacataaaaaagtccttgttttaggcctagctaaaagt
ggtgttgcagcagcggagattttacatgagcttggcgcctttgtgacagtcaatgattct
aagccgtttgatgaaagccctgatgcacaaggtctattgcaaaaaggcattaccgttatt
tgtggtcgtcatcccgaggatttacttgatgaaggctttgaaatagtcgtcaaaaatcca
ggtatcccatatagcaataacatcgtagcagatgcgataaaacgtgaaattcctgtatgg
acagaaatagagcttgcttatttaattagtgatgcaccatttgttggtattactggttct
aatggtaaaacgacaacgacgacattaatattcgaaatgctggaaaatggtgcgaagaag
ccattaatcgcaggtaatattgggaccgtagcttgtggagtagcaaaagaagcgcaagaa
gataatgtcattgtgacagagctttcatcattccaactgatgggtactaaaacatttaaa
ccaaaaatttctatattaacaaatctttatgatgcacaccttgattatcacggtacgttt
gataactatgctgaagcaaaatttggcgtaacacgcaatcaagatgaaacagattatttc
attttcaatgcggatcagccgattgttgtgggctatgctgcaaaatccaatgcacagaaa
gtgccgttttcgtcgaaaggacgtaccgagcaagggattagtgccgatgatacaacaatc
tattggcaaggtgaaccgtttatggacagagcgattattgcattgccaggtaaacataat
ttagaaaatattttagcggcagtagcagcttgtatattgatcggctgcgaaaaagctaaa
atggaagaggttttagctaaatttggaggtgtccgtcaccgtacccaatttgtacgtgag
tggaatggacggaaaatttataatgattctaaagcaactaattgcctagcaacgaaaagt
gcgctggatgcattccaagcacccgttattttgctagcgggtggtttagaccgtggacat
tcttttgaagagttacgaccttgcatggggcatgtcaaaggtgtagtagcgttcggtgaa
acgggcttacgctttgtagaatttgctaagtcttgtggagtttcacaaacggtcattgct
caaaatgtagaggatgcagttcattatgccgcaccaatgtctgcagaaggagatgttatt
ttattatcacctgcctgtgcaagttgggatcaatatgacagctttgaaatccgtggggat
gtttttattgatgctgtaatgaagctgtaa
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