Lysinibacillus varians: T479_04715
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Entry
T479_04715 CDS
T03062
Name
(GenBank) peptide ABC transporter ATP-binding protein
KO
K15583
oligopeptide transport system ATP-binding protein
Organism
lgy
Lysinibacillus varians
Pathway
lgy01501
beta-Lactam resistance
lgy02010
ABC transporters
lgy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T479_04715
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T479_04715
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T479_04715
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgy02000
]
T479_04715
Transporters [BR:
lgy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
T479_04715
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
FtsK_SpoIIIE
AAA_29
AAA_16
ABC_ATPase
nSTAND3
DUF87
Motif
Other DBs
NCBI-ProteinID:
AHN20851
LinkDB
All DBs
Position
complement(1001745..1002800)
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AA seq
351 aa
AA seq
DB search
MSKTILEVKDLKINFKTYAGLVHAVRGVNFDLKEGETLAIVGESGSGKSVTSNALMKLIP
QPPGIYESGQILFNGRDLIPLSEKEMSKVRGNEIAMIFQDPMTSLNPTMKVGRQITEVIL
QHKKVSKDAAKKRAIELLTQVGIPFPEKRYNQYPHEFSGGMRQRVVIAIALAADPKLLIA
DEPTTALDVTIQAQILELMKEIQKNSKTSIIFITHDLGVVANVADRVAVMYAGQIVEYGT
VDDIFYNPKHPYTWGLLGSMPDLDSNEDELLRTIPGSPPDLTNPPKGDAFAARNEFAMAI
DYEQEPPMFKVSDTHYAKTWLLHPDAPKIPLPDAVAKRIEGFIAKEEEFND
NT seq
1056 nt
NT seq
+upstream
nt +downstream
nt
atgagtaaaacaattttagaagtaaaagatttaaaaattaactttaaaacttatgctgga
cttgtccatgctgttcgtggtgtaaacttcgatttaaaagaaggtgaaacgctagcgatc
gttggtgaatctggttctggtaagagtgttacgagtaacgccttaatgaaattaattcca
cagccacctggtatttatgagtcaggacaaattttattcaatggccgtgatttaattcca
cttagtgaaaaagaaatgtcaaaagtgcgcggaaatgaaattgctatgattttccaagat
ccgatgacaagtttgaacccaacgatgaaggtcggacgtcaaattactgaagtaatttta
caacataaaaaagtttcaaaagatgcggcgaaaaaacgcgcgattgaacttttaacgcaa
gtaggtattccattccctgaaaaacgttataaccaatatccacatgaattttcaggcggg
atgcgccaacgtgttgtaatcgctattgcacttgcggcagatccgaagttgttaattgcc
gatgagcctacaacagcattagacgtaactattcaagcacaaattttagaattaatgaaa
gaaatccaaaagaattctaaaacatctatcattttcattacccacgaccttggtgttgtg
gctaacgttgctgaccgtgtagccgttatgtacgctggtcaaatcgttgaatacggtaca
gtagatgatattttctataatccaaaacatccttatacttggggattacttggttctatg
cctgatttagatagtaatgaggacgagctattacgtacgattccaggttcaccaccggat
cttacaaatcctccaaaaggtgatgcgtttgctgctcgtaatgaatttgcaatggccatt
gactatgagcaagagccaccaatgttcaaagtaagcgacacacactatgcaaaaacttgg
ttgttgcatcctgacgcgccaaaaattccacttccagatgcggttgctaaacgtattgaa
ggctttattgcgaaggaggaagaattcaatgactaa
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