Lysinibacillus varians: T479_04730
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Entry
T479_04730 CDS
T03062
Name
(GenBank) ABC transporter substrate-binding protein
KO
K15580
oligopeptide transport system substrate-binding protein
Organism
lgy
Lysinibacillus varians
Pathway
lgy01501
beta-Lactam resistance
lgy02010
ABC transporters
lgy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T479_04730
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T479_04730
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T479_04730
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgy02000
]
T479_04730
Transporters [BR:
lgy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
T479_04730
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Ortholog
Paralog
GFIT
Motif
Pfam:
SBP_bac_5
Motif
Other DBs
NCBI-ProteinID:
AHN20854
UniProt:
A0ABY2T463
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All DBs
Position
complement(1004793..1006448)
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AA seq
551 aa
AA seq
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MNKNKKFLLLTVLAVFSLVLAACGFGGDSSDKAKDDKKDSGSSETAKELNLVIPSEPPSL
HPQLATDSTSSAILINVFEGLTRADADGQPQPAMAEKWDVSEDGLTYTFHLRDAKWTNGD
PVVAGDFEYAWKWALNPENLSEYASVFYPIKGAEAYNTGAGSVDEVGIKAEDEKTLVVTL
ANPTAYFLELTAFKTYSPINQKVVEGKDDWYAEAGENYVTNGPYTLDTWKHSDSIVLKKN
DGYWDAANVAVNTVNIGMVENEATAVTMFKNGEIDYLGSPYQTVALDAIDGFKADKSLNI
DDYAAIYWYKFNTTDKVTGNANIRKALTLAIDRQGLIDNVTKGEQKPALGMVPSAISGFE
EDRGYYKDNDVEGAKAALEAGMKELGIKDAKDIKINLSFNTSEAHASIAQYIQEGWSKNL
GITVSLDNSEWQVYLEKLNVLDYQIGRMGWIADYNDPYTFLEMYDTAKNGNNDTGWENPK
YKELLKQSVAEVDTAKRLELLKEAEAIAVSEFPVAPIYYYTNLSVKQKYVKNMGPDRLGI
IQLKNVDLDAK
NT seq
1656 nt
NT seq
+upstream
nt +downstream
nt
atgaataagaacaaaaagtttttattactaactgtccttgcagtattttcattagtactt
gctgcatgtggctttggtggagattcgtctgacaaagcaaaagacgataaaaaagattct
ggttcatcagaaacagcaaaagagctgaacttagtaataccttctgagccaccatcttta
cacccacaacttgcaacagattctacatctagtgcaatcttaattaacgtatttgaaggt
ctaactcgtgcagacgctgatggacaaccacagccagctatggctgagaaatgggatgta
agtgaagatggtttaacttacacattccacttacgcgatgcaaaatggacaaacggagat
ccagtagttgctggcgacttcgaatatgcttggaaatgggctttaaatccagaaaaccta
tctgaatatgcttctgtattctacccaattaaaggtgctgaagcttacaatacaggtgct
ggttctgttgatgaagtaggaattaaagctgaagatgaaaaaacattagttgttacttta
gcaaacccaactgcttacttcttagagttaactgcattcaaaacttactcaccaatcaac
caaaaagtggttgaaggtaaagatgattggtacgctgaagctggtgaaaactacgtaaca
aacggaccatatacattagatacttggaaacacagtgattcaatcgtgcttaagaaaaac
gacggttactgggatgctgcaaacgtagcagttaatacagtaaacatcggtatggttgaa
aacgaagcaactgctgtaacaatgttcaaaaatggagaaattgattacttaggttctcca
taccaaacagtagcacttgatgctattgatggattcaaagctgacaagtcattaaatatt
gatgactatgctgctatctattggtacaaattcaacacaacagataaagttactggaaac
gctaacatccgtaaagcgttaacattagcaatcgaccgtcaaggcttaattgacaacgta
actaaaggtgaacaaaaacctgcattaggtatggttccatctgcaatcagtggttttgaa
gaagaccgcggttactacaaagataacgatgttgaaggtgctaaagcagcacttgaagct
ggtatgaaagaacttggtattaaagacgcgaaagatatcaaaatcaacttatcattcaat
acaagtgaagcacacgcttctatcgctcaatacatccaagaaggatggagcaaaaacctt
ggaattactgtaagtcttgataactcagaatggcaagtttacttagaaaaacttaacgtt
cttgactatcaaatcggtcgtatgggctggattgcagactacaacgatccttacacattc
ttagaaatgtacgatactgctaaaaacggtaacaacgatactggttgggaaaatccgaag
tacaaagaattgttaaaacaatcagttgcagaagtagatacagctaaacgtcttgagcta
ttaaaagaagctgaagctatcgcagtttcagaattcccagttgcgccaatctactactac
acaaacctttcagtaaaacaaaagtatgttaaaaacatgggaccagatagacttggtatc
atccaacttaaaaacgttgatttagacgctaaataa
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