Lysinibacillus varians: T479_04765
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Entry
T479_04765 CDS
T03062
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T479_04765
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgy03400
]
T479_04765
Enzymes [BR:
lgy01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
T479_04765
DNA repair and recombination proteins [BR:
lgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T479_04765
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PriA_3primeBD
PriA_C
DEAD
ResIII
Helicase_C
Zn_ribbon_PriA
PIF1
T2SSE
Zn_ribbon_6
AAA_30
nSTAND_NTPase5
ATPase_2
SLFN-g3_helicase
IBR_1
TPR_Trm732
AP1AR
Motif
Other DBs
NCBI-ProteinID:
AHN20861
UniProt:
A0ABY2TB19
LinkDB
All DBs
Position
1014623..1017037
Genome browser
AA seq
804 aa
AA seq
DB search
MNVLYAEIIVDVSTYHVDRSFDYAVPVEWVAVIEKGCRVKVPFGPRNVLGFVVGLKHETD
VPTNKIKPIAQILDIEPVFTEEMLLMAKWLKNETICYEIDALQVMLPSALRAKYEKIVKL
LDHQTILPMAVQQIFGKRQQANFKEFERAGLLPLLKTLIADKIVKIENVVKQQGNVKEVR
MVKITEDEQALSNAMQEASRAAKQRSLIEWMASHLGEVFTPQQIYEATAVSAAVLQAVIE
KGAASFIQEEVYRDPFTKDVARTQSLQLTDEQAVALKAITHSIETQSAATFLLQGVTGSG
KTEVYLQAIQKVLNDGKEAIMLVPEISLTPQMTERFRSRFGEMVAVMHSGLSVGEKYDEW
RKIQQGKVRVVVGARSAIFAPFTNLGLIILDEEHESTYKQEDSPRYHARDVAIWRSQYYR
CPVILGSATPALESYARAKKGVYTLLTLKQRALHQAMPTVYVADMREELQKGNRSMFSEL
LIEGIRTRLERREQMVLFLNRRGYSSFVLCRDCGTVVQCPNCDISLTYHRTTEKLKCHYC
GYEEHVPQICPQCQSEHIRYFGTGTQKVEEEIYKLFPEARVLRMDVDTTKHKGAHEEILQ
AFGEGQADILLGTQMIAKGLDFPNITLVGVLSADTSLHLPDYRAAERTFQLLTQVSGRAG
RHDKAGEVVIQTYTPEHYAIELAKVQDYEPFYEREMFLRRRSGYPPYYFVALIQVSHEDV
MMAAEYAGRAADWLRGNLSNQVSIIGPTVASISRLQNRYRYQCLIKYKIEPNLIPVLQRL
LAMYRAEWIKQGILMTVDLDPSTI
NT seq
2415 nt
NT seq
+upstream
nt +downstream
nt
atgaacgttttatacgcagagatcatagtggatgtttcaacataccatgtagatcgctca
tttgactatgcggttcctgtagaatgggtagctgttatagagaaaggctgtcgtgtaaaa
gtaccatttggaccgagaaatgtactaggatttgttgtaggtttaaaacatgagacagat
gttccaactaataaaataaagccgattgctcaaattttagatatagagcctgtttttact
gaagaaatgttgttgatggcaaagtggcttaaaaatgaaacaatttgctatgaaattgat
gctttgcaagtaatgctaccctccgcattacgagctaagtatgaaaaaatcgtcaaatta
ctcgatcatcaaacgattttgccaatggctgtccaacaaatttttgggaagcgacaacag
gcaaactttaaggaatttgaacgggcaggattattgccactcttaaaaacgttaattgcc
gataaaattgtaaaaatagaaaatgtcgtgaagcaacaaggcaatgtaaaagaagttcgt
atggtaaagataactgaggacgaacaagcattaagcaatgctatgcaagaggcatcaaga
gctgcgaagcaacgttctttaattgaatggatggcttcgcatttaggtgaagtttttaca
ccacagcaaatttatgaagcaactgctgtctcggctgctgtattacaagcggttattgaa
aaaggcgcagcaagttttatacaagaagaagtgtatcgcgatccttttacaaaggatgtt
gcacgtacacagtccttacaattaacggacgaacaagcagttgcattaaaagcaattacg
cattctattgagacacaatctgctgccacctttttattgcaaggtgttacaggtagtggc
aaaacggaagtttacttgcaagcgattcaaaaggttttaaatgacggcaaggaagctatt
atgttagtgcctgaaatttcgttaacgccccaaatgacggagcgttttcgtagtcgtttt
ggtgagatggttgccgtgatgcatagtgggttatctgttggagagaagtatgatgagtgg
cgtaaaattcaacaagggaaagtaagggttgtagtaggtgcccgttcagcaattttcgca
ccctttactaatttagggctaattatcttagatgaagagcatgaatcgacttacaagcag
gaagattcaccccgttaccatgcgagagatgtagccatttggcgaagccaatattaccgt
tgtcctgttattttaggtagtgcgacacccgctcttgagtcatatgcccgtgcgaaaaaa
ggggtctatacactattaacgttaaaacagcgtgcgctgcatcaagcaatgccaactgta
tatgttgcagatatgcgagaggaacttcaaaaaggaaaccgctcgatgttttcggaacta
ctaattgaagggatacgaacgcgacttgaacgacgagaacagatggtgttgtttttaaat
cgaagaggatattcgtcctttgtgctatgtcgtgattgtgggacggtcgtgcaatgtccg
aactgtgatatttcattaacctatcatcgcacaacggaaaaacttaagtgtcattactgt
ggttatgaagagcatgtgccacaaatttgcccgcaatgtcaaagtgagcatattcgatat
tttggtacagggacacaaaaggtagaagaagaaatctacaaattatttccagaagcaagg
gtattacgaatggatgttgatacaacaaagcacaagggggcacatgaagagattttgcaa
gcatttggtgaggggcaagctgatattttactcggtacgcaaatgattgcaaagggactt
gattttcctaatattacacttgttggtgtgcttagtgccgatacatcattacatttacca
gactaccgtgctgcggagcggactttccaattacttacacaggtaagtggtagagcaggt
cgtcatgataaagcgggtgaagtcgtaatccaaacttatacgcctgagcattatgcaatt
gaattagctaaagtacaagattacgagccattttatgaacgggaaatgtttttacgccgt
cgttcgggctatccaccttattatttcgttgcacttatacaagtatcgcatgaagatgtc
atgatggcagcagagtatgcaggacgtgcagcagattggcttcgaggaaatttatccaat
caagtgtccattattggcccaacagttgcgagtattagccgcctccaaaatagatatcgc
tatcaatgtttgataaaatataaaattgaaccaaatctgatacctgtcttgcaacgttta
cttgcgatgtatcgagcagaatggattaaacaggggatattaatgacggttgatttagac
ccgtctacgatataa
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