Lysinibacillus varians: T479_04900
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Entry
T479_04900 CDS
T03062
Name
(GenBank) chromosome segregation protein SMC
KO
K03529
chromosome segregation protein
Organism
lgy
Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lgy03036
]
T479_04900
Chromosome and associated proteins [BR:
lgy03036
]
Prokaryotic type
Chromosome partitioning proteins
Condensin-like complex
T479_04900
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_23
AAA_21
AAA_15
AAA_29
ABC_tran
Motif
Other DBs
NCBI-ProteinID:
AHN20887
UniProt:
A0ABY2TBF8
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All DBs
Position
1043969..1047550
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AA seq
1193 aa
AA seq
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MFLKRLEVIGFKSFAERIGIDFVPGVTAVVGPNGSGKSNVTDAIRWVLGEQSAKSLRGAK
MEDVIFAGSDSRKPLNFAEVTLILDNTDEQLAFSYTEVSVTRRVYRSGDSEYLLNNQQCR
LKDITDLFMDSGLGKEAFSIISQGRVDEILNSRPDDRRSIFEEAAGVLKYKLRKKKAEHK
LVETDENLYRVLDILHELDSRLEPLQIQASSARDYVQMSTELKDFDIAILVHDLKNCAQS
LHALKEEYAQLSETEQKQAKDIQALETQTTDIRKHLKELDVLLDAAQSELVDATMEMERW
DGRKALMAEKRQNATNQLQQLNTSLLEAQNEVEVLVAQELEKKQLFVEKQQEVLTLKQII
KQLEQSLNRSVTEIEQEMEEHKNRYIDSLNEEATVKNELKNIEQQLSQQKAMAARMTDQT
DEIGQELIEVVAEKETLVGLHTTTTTALQQKLEQYEALQMQFKKVNLSFNDKQEMLYKAY
QHQQQLKARKDTLAELEADFSGFFHGVKEVLLARDKGELFGIEGAVAELIQVNGKYSQAI
ETALGAASQHIVTTNEQNAQQAIRWLKQKRAGRATFLPKTVMKSRKINPSAIQLATEHPA
FVQMADALVTFDEDNRSIVENLLGNVIVAAHLEGASQIARLCGFRYRVVTLEGDIVNAGG
SLTGGAAKQQSSLFTRKAELDGLIAKLEALETSIYSAEQAVATEKETLATLRDKVEQLKL
EGEQLRKEEMQQASRLRELEVVEKSLSARVSFASNETQDVKTREEALLAQKEVATARLAA
LAEELVAINETVEQLGKIKLQSETEKDVLREQTAEKRSELAVMQEQMSQVQIATAELALQ
LNKARQKVDNISQEIIWLQSDESTKLLSDEEVEEQVATWKARRETLQVTITQKKGEKAAQ
QQELTTLEEQLKELQRIHKGFIEAIRANELKRNRVEFEMSNFKNQLEENYQLTFEEALEV
ALTIEDEEHMRRRVKLLKKSIEELGPVNLSAIEEFERVQERHSFLTEQREDLLEAQDTLH
EAIKEMDEEMTIRFSETFFAIREQFKRVFRELFGGGQADLVLLDPDNMLDTGIEIVAQPP
GKKLQNLSLLSGGERALTAIALLFSILNIRPVPFCILDEVEAALDEANVVRYSEYLKKFS
RNTQFIVITHRKGTMEGADVLYGITMQESGVSKLVSVKLEDEPVLAEQRSEQA
NT seq
3582 nt
NT seq
+upstream
nt +downstream
nt
atgttcctaaaacgactcgaagtgattggctttaaatcttttgcggagcgcattggtatt
gactttgtaccaggtgttacagctgttgttggacctaatggcagtgggaaaagtaatgta
actgatgctattcgttgggtactcggggagcaatcggcaaagtcgttacgtggggcaaag
atggaagatgttatttttgctgggagtgactctcgaaagccactaaactttgcagaggta
acattaattttagataatactgatgagcaacttgctttttcgtatacagaggtcagcgta
acaagacgcgtataccgttcaggtgatagtgaatatttattaaataaccagcagtgtcgc
ctgaaggatattacggacttgtttatggattcgggacttgggaaagaggctttttcaatt
atttcacaaggccgtgtcgatgaaattttaaatagccgcccggacgatcgccgctcaata
tttgaagaggcggctggtgttttaaaatataagctacgaaagaaaaaagcagagcataaa
cttgtagaaacagatgaaaacctttaccgtgttttagatattttacatgagttggatagc
cgtttggagcctttgcaaatacaagcttctagcgcaagagactatgtacaaatgtccacg
gaactaaaggattttgatattgcgatccttgtgcacgatttaaaaaattgtgcacaatct
ttgcatgcattgaaagaagagtatgcgcagctatctgaaacagagcaaaaacaagcaaag
gatattcaagcgctagaaacccaaacgacggatattcggaaacatttaaaagagttggat
gttttattggatgctgcacaatctgagcttgtagatgcaacgatggaaatggaacgttgg
gatggtcgtaaagctttaatggctgaaaaacgccaaaatgcaacgaatcaattacagcag
ttgaatacatcattacttgaagcgcaaaatgaagtagaggtattagttgcgcaagaactt
gagaaaaaacaattgtttgtagaaaaacaacaagaagttttaacgctaaagcaaatcatt
aagcaattagagcaatccttaaaccgttcagttacagaaattgaacaggaaatggaagag
cataaaaaccgctatatcgattcattaaacgaagaagcaacagtcaaaaatgaattaaaa
aatatcgaacaacaattatcacaacaaaaagcaatggcagctcgtatgacagaccaaacg
gatgagattggtcaagaattgattgaagttgtggcggagaaagaaacacttgttggccta
catacaacaacaacgactgcattgcaacagaagctcgaacaatatgaagcattgcaaatg
cagtttaaaaaagtgaatctttcttttaatgataagcaagaaatgctgtataaggcgtat
cagcaccaacaacaattaaaagctagaaaagatacattagcagagctagaagctgatttc
tctggcttcttccatggtgttaaggaagtattactggcgcgtgataaaggtgaattattt
ggtattgaaggcgcagtggcggaattgattcaggtcaatggcaaatattcgcaagcgatt
gaaacggccttaggtgccgcctcccaacatattgtgacgacgaacgaacagaacgcccaa
caagctatccgttggttaaagcaaaaaagagcggggcgtgcgacattcttaccaaaaacg
gttatgaaatcacgcaaaattaatccgtcagccattcagcttgctacggagcatccggcg
ttcgtacaaatggcagatgcccttgtcacgttcgatgaggacaatcgttccattgttgaa
aatttgcttggcaatgtcatcgttgcagcgcatttagaaggggcaagtcaaattgcgcga
ttatgtggtttccgttaccgtgtcgtaacgctcgaaggggatattgtcaatgctggaggt
tctttaacgggtggtgcagcgaaacaacaatcttccctatttacaagaaaagccgagctc
gatggcctgattgctaagctagaagcattagaaacgtcgatttatagtgcagagcaggct
gtagcaacggaaaaagagacattggccacattacgtgacaaagtagaacaattaaaacta
gaaggcgaacaactgcggaaagaagaaatgcaacaggcaagtcgccttcgagaattagag
gttgtagaaaaaagtctatccgcccgagtgtcctttgcttcaaatgaaacgcaagatgta
aaaacacgtgaggaagcgctgcttgctcaaaaggaagtagctactgcacgtttagcagcg
ctagctgaagaattagtagcgataaacgagacggtagaacaattaggtaaaattaaacta
caaagtgaaacagaaaaagatgttctgcgcgaacaaacggcagaaaaacgttcagagtta
gcggtaatgcaggagcaaatgtcgcaagtacaaattgcgaccgctgaacttgccctacaa
ttaaacaaagctcgccaaaaagtcgacaatatttctcaggaaataatctggcttcaatct
gatgaatcgacaaaattattgagtgatgaagaagtggaagagcaggtcgcaacttggaaa
gctagaagagaaacgttacaagtgacaattacccagaaaaagggagaaaaagcggcgcaa
caacaggaattaacaacgttagaagagcagctaaaggaattgcaacgtatacataaaggc
ttcattgaagcaatacgtgcgaatgaattaaagcgcaatcgcgtagaatttgagatgagt
aattttaaaaatcagctcgaagaaaactatcaactaacgtttgaagaggcactggaagtc
gctttaactattgaagacgaagagcatatgcgacgtcgcgtcaagttattgaaaaaatct
attgaagaattaggtcctgtaaacttaagtgcgattgaagaatttgagcgtgtccaagaa
cgacattcttttttaacagagcaacgtgaggatttactcgaagcgcaggatactttacac
gaagccattaaagaaatggatgaagaaatgacaatacgctttagtgaaacattttttgcc
attcgagagcagttcaaacgggtattccgtgaattgtttgggggcggtcaggcagattta
gtattacttgatcctgacaatatgcttgatacgggcattgaaattgttgcgcaaccgcca
gggaaaaagttgcaaaatttaagtttactttctggtggtgaacgtgcacttaccgcgatt
gctttactattctccattttaaatattagacctgtgccgttctgtatactcgacgaagta
gaagcggcattggatgaggcaaatgttgttcgatacagcgaatacttgaaaaagtttagt
cgcaatacccaattcattgttattacacaccgtaaaggtacaatggagggagctgacgta
ctgtatggtattacgatgcaggaatcaggtgtatcaaaacttgtatcagtaaaattagaa
gatgaacccgtacttgcggagcaaaggagcgaacaagcatga
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