KEGG   Lysinibacillus varians: T479_05520
Entry
T479_05520        CDS       T03062                                 
Name
(GenBank) ABC transporter substrate-binding protein
  KO
K02055  putative spermidine/putrescine transport system substrate-binding protein
Organism
lgy  Lysinibacillus varians
Pathway
lgy02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    T479_05520
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02000 Transporters [BR:lgy02000]
    T479_05520
Transporters [BR:lgy02000]
 ABC transporters, prokaryotic type
  Mineral and organic ion transporters
   Putative spermidine/putrescine transporter
    T479_05520
SSDB
Motif
Pfam: SBP_bac_6 SBP_bac_11 SBP_bac_1 HTH_Tnp_Tc3_2_like
Other DBs
NCBI-ProteinID: AHN21004
UniProt: A0ABY2TB91
LinkDB
Position
1171925..1173013
AA seq 362 aa
MAIQKLWKKSLVGVLAISMLAACSDSSSNANDIKSDLTLDEITEKAKQEGTVNSVGMPDT
WANWVETWQELETEYTLKHQDTDMSSAEELAKFEAEKDDATADIGDVGIAFGPIAKDKGL
TLPYKTSYWDDIPDWAKDEEGHWIVGYTGTIAFLTDKNNVKNPPTSWEDLKNGDYHVSIG
DALTANQAQFAILAAAMAFGGDESNIQPGIDFFAELAKQGRLQGDPTVANLEKGEIDVAI
LWDFNALGYRHQIDEQRFDVVIPSEGSVTSGYATVINKYAKNPHAAMLTREYILSDAGQE
NLAKGYARPIRENVQLPQEVKDLLLPADMYKNAQPVSDQKQWEETTKQIPQMYQEQVLIH
AK
NT seq 1089 nt   +upstreamnt  +downstreamnt
atggcaattcaaaagctatggaagaaaagtttagttggtgtattagcaatttctatgtta
gcagcatgttctgacagttcgtctaatgcaaatgacatcaaaagtgatttaacgcttgat
gaaattacagaaaaggcaaaacaagaaggtactgtcaattcagtcggtatgccggacaca
tgggcaaactgggtagagacatggcaagagcttgaaacagagtacactctcaaacatcag
gacacagatatgtcgagtgcagaggaattagcgaagtttgaagcagaaaaagacgatgca
acagccgatattggcgacgtaggaattgcctttggtccaatcgctaaagataaaggtcta
acattgccatacaaaacttcctattgggatgatattcctgactgggcaaaagatgaagag
ggccattggattgttggttatacagggacaattgcatttctaacagataaaaacaatgtg
aaaaatccaccaacgtcttgggaagatcttaaaaatggcgactatcatgtcagcattgga
gatgcattaactgcaaaccaagcacaatttgcgatattagctgcagcaatggctttcggt
ggagatgaatccaatattcagccgggtatcgacttttttgcggaattagcaaaacaagga
cgcctacaaggtgatccaacagtcgctaatttagaaaaaggagagattgatgttgcaatt
ttatgggatttcaatgcactaggttatcgtcatcaaatcgatgagcaacgttttgatgta
gtcatcccatcggaaggctctgtcacatcaggctacgcaactgttattaataaatatgca
aaaaatccacatgctgcaatgttaacacgagaatatattttatcggatgcaggacaggag
aacttagcaaagggttatgcccgaccaattcgtgaaaatgtgcaattacctcaagaagta
aaggatttattattaccagcagatatgtataaaaatgcgcaacctgttagcgaccaaaag
cagtgggaggaaacaacaaagcaaattccacaaatgtatcaagagcaggtattaatccat
gccaaataa

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