Lysinibacillus varians: T479_05540
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Entry
T479_05540 CDS
T03062
Name
(GenBank) spermidine/putrescine ABC transporter ATP-binding protein
KO
K02052
putative spermidine/putrescine transport system ATP-binding protein
Organism
lgy
Lysinibacillus varians
Pathway
lgy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T479_05540
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgy02000
]
T479_05540
Transporters [BR:
lgy02000
]
ABC transporters, prokaryotic type
Mineral and organic ion transporters
Putative spermidine/putrescine transporter
T479_05540
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Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
AAA
Rad17
RsgA_GTPase
nSTAND1
ABC_ATPase
AAA_25
PRK
AAA_22
AAA_5
AAA_29
AAA_15
AAA_18
Mg_chelatase
AAA_30
nSTAND_NTPase5
ATP-synt_ab
AAA_16
nSTAND3
AAA_23
NB-ARC
TOBE_2
G-alpha
AAA_28
RNA_helicase
AAA_19
NACHT
ORC-CDC6-like
Motif
Other DBs
NCBI-ProteinID:
AHN21008
UniProt:
A0ABY2TFJ7
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Position
1175548..1176549
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AA seq
333 aa
AA seq
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MSYIVIEGLHKKYDQTTVLSNIDMTIEKGQLITLLGPSGCGKSTILRIIAGLTNATAGEI
QLEGQNMNGVQPKERQVGMVFQSYALFPNMTVKENIAFGLRMQKVNNTELEQRVQEMLHI
VHLTEKANAYPKELSGGQQQRVALARALIVRPKVLLLDEPLSALDAQIRKKLQTDLRAIQ
RKLGMTMILVTHDQDEAMAVSDKIFVMSNGQIAQYGTPTEIYTNPQSEFIANFIGHYNVI
PRQVLETMIGEKLPGDNNKFAIRPEALHLEMMEGDLCLRGVATQSLMSGNIIRTTLEGDC
MFTMEQLHQRGHTLELGKNYNCYVAKEDVIALS
NT seq
1002 nt
NT seq
+upstream
nt +downstream
nt
atgagctatattgtgattgaaggacttcataaaaaatatgaccaaacaactgtcttatcc
aatattgatatgacaattgaaaaaggtcaattaattacgcttttagggccgagtggctgt
gggaaaagtaccattttgcgtattattgcgggcttaacaaatgctacagcaggagaaatt
caattggaaggacaaaacatgaatggtgtccaaccgaaagagcgccaagtgggcatggtt
tttcaatcttatgcgctatttcccaatatgactgttaaagaaaatatagcatttggtttg
cggatgcaaaaagttaataatacagagctagaacaacgtgtacaagaaatgctccatatc
gtccatttgacagaaaaagcgaatgcttatccaaaggagttatccggcgggcaacagcaa
cgtgtagcgcttgcacgtgcgcttattgtgcgaccgaaagtattgcttttagatgaacct
cttagtgcacttgatgcccaaatacgaaaaaaattgcagaccgatttacgggcaatacaa
cgcaagcttggcatgacgatgattttagtaacacatgatcaagatgaagctatggctgtg
tcagacaaaatatttgtgatgagtaatgggcaaattgcgcaatatggtacaccgacagag
atttataccaatccacaaagtgaatttatcgccaatttcattggtcattataatgttatt
cctagacaagtgttagagacaatgataggagaaaaattacctggggataataacaagttt
gccatacgaccagaagctcttcatttagagatgatggaaggtgacctttgccttcgcggt
gtagcgacacagtcactcatgagtggcaatattatccgtacaacgcttgaaggtgactgt
atgtttacaatggagcagttacatcaacgtgggcatacgcttgaattgggtaaaaactac
aactgttatgtagcgaaggaagatgtgattgcactgtcatga
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