KEGG   Lysinibacillus varians: T479_07640
Entry
T479_07640        CDS       T03062                                 
Name
(GenBank) DNA polymerase III subunit epsilon
  KO
K03722  ATP-dependent DNA helicase DinG [EC:5.6.2.3]
Organism
lgy  Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgy03400]
    T479_07640
Enzymes [BR:lgy01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.3  DNA 5'-3' helicase
     T479_07640
DNA repair and recombination proteins [BR:lgy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    T479_07640
SSDB
Motif
Pfam: Helicase_C_2 RNase_T DEAD ResIII DEDDh_C Helicase_C Rv2179c-like TraI_2_C
Other DBs
NCBI-ProteinID: AHN21332
LinkDB
Position
1608268..1611039
AA seq 923 aa
MMESQKYAIVDLETTGHSPANGDRMIQIAIVIMKDWEIERTYTKFIHPGKSIPSFIQDLT
HITDEDVKDALPFEAHADYIYELISDCVFVAHNTDFDLSFLQAEFKRAGLPKWHGKKMDT
VELAKILFPMSLSFKLGDLAADLNIELENAHRADDDALATAELFKRSWKELLSLPQLTLE
QMHKRSFRLKSNLSQLFFEALQFKRHHRTTDENITYYRNIAICDGRQKRVLKSELAPYPK
TINEKEALMTKAMPNFEQRPAQFTMMDTIWQALNDKEECVIEASTGIGKTVGYLLPSILY
ARANNKKIAISTYTAHLQEQLVEEELLKIEKILDTKVNVAVLKGMQHYIDLARFEQCMAY
ADESYDDTFTILQLLVWLTKTQTGVLSELNVSGGGQLFLEKIRKLPEEKPTKGFDFYEQA
LKNSTTADCIVTNHSMVISDLVRQTPIFRQIDGWIIDEAHQVIQAAMQQDETVFSYTQWK
YIFGQIGTMEDTALFQQFSQAAKKKQRIPMQSLQQLDKQFIRLQRVFDDTIGHAVQKMQQ
QVRGKQASSKCTLFLEDVSLAKEPLLQVSKLLQHWLDLAVEAGKAFENNIEQLDKNEVFI
LSEWHYWIRELKLRIAEWEEIFLLHQDEHSVWFEFDLRSVPGSLHVYKKPVNVTPIIEKV
MAPLRKQASIVWTSGTLTVPGNERFITRQLGISDSVQVMQLQAPASYYSGAKAFIVTDMP
DIQQVTQADYIEAVAHAITRTVRMTEGRCFVLFTAQDMLRKTVELIQDSELLDDYMLFAQ
GVTGGSRMRILKSFQKFNQAVLFGTNSFWEGVDVPGDALSSVIVVRLPFSSPEEPVFKAR
AKHLTLQGHNSFTELSLPEAIMRFKQGFGRLIRSSQDKGAFIVLDRRISTKSYGKEFIHA
LPPIDVKKLQLPELLKELSNWQK
NT seq 2772 nt   +upstreamnt  +downstreamnt
atgatggaaagtcaaaagtatgcaatagttgatttggagacgacaggtcattctccagca
aatggtgaccgaatgattcaaattgccattgtcattatgaaggattgggaaatagaacgt
acctatacaaaatttattcatccagggaaatcgattccgtcctttattcaagatttaacg
catataacggacgaggatgtgaaagatgccttgccgttcgaggcacatgccgactacata
tacgaattaatttccgattgtgtttttgtcgcgcataatacggattttgacttatccttt
ttacaagcagaatttaaacgagcgggtttaccaaaatggcatggtaagaaaatggataca
gttgaactagcaaaaattttatttcccatgtctcttagctttaagctaggtgatttagcc
gcagacttaaatattgaacttgaaaatgcgcatagagcggatgatgatgcgctggcaacg
gctgaactttttaaacgtagttggaaagagcttctaagccttccacaactaacgctcgaa
caaatgcataaacgttcattccgtttaaaatctaatttgtcccagcttttctttgaagca
ttacaatttaaacgtcatcatagaacaactgatgaaaatattacgtactatcgcaatatt
gcaatttgtgatggtcgtcaaaaacgggttctaaaatccgagctagcaccttatccaaaa
acaataaatgaaaaagaagcactgatgacaaaagctatgcccaacttcgagcaacgacct
gcgcaatttacgatgatggatacgatttggcaagcattaaatgacaaagaagaatgtgtg
attgaggcttcgacgggcataggcaaaacagtcggttatcttttacctagtattttatat
gcgcgggcgaacaataaaaaaattgcgattagtacgtatacagcacatctacaagagcaa
cttgtagaagaagaactactaaaaatcgaaaaaattcttgatacaaaagtaaacgttgct
gtactgaaaggcatgcaacattatatcgaccttgctcgctttgaacagtgtatggcatat
gcagatgaatcatatgatgatacatttaccattttacagttgcttgtctggctgacaaaa
acgcagacaggcgtattaagtgaacttaatgtttccggtgggggacagctttttttagaa
aaaattcgcaaattgcctgaggagaaaccgacaaagggctttgatttttatgagcaagca
ttaaaaaatagtacgacagcggattgcatcgtgacaaatcattcgatggtcattagtgat
ttagttcgacaaacaccaatctttagacaaatcgatgggtggattatcgatgaagcgcat
caagttattcaagcagctatgcaacaagatgaaaccgtcttttcctacacacaatggaaa
tatatttttggccaaattggaacaatggaagatacagcgctctttcaacaattcagtcag
gcagctaaaaagaaacagcgcatcccaatgcaaagtttacagcaacttgacaaacaattt
atccgattacagcgcgttttcgatgacaccattgggcatgctgtacaaaaaatgcaacag
caagttcgaggcaaacaggctagtagcaaatgtaccctgttcttagaggatgtatcacta
gcaaaagagccgcttttacaagtcagcaaactattacagcactggcttgatctcgcggtg
gaagctggtaaagcttttgaaaataatattgaacagttagacaaaaatgaggtttttatt
ttatctgagtggcactattggattcgagagttgaagctaagaattgcggaatgggaggaa
attttccttttacatcaggacgaacattccgtttggtttgaatttgatttacgcagtgtc
cctggcagtctgcatgtttataagaagccagttaatgttacaccaattatagaaaaagta
atggcgccacttcgtaaacaagcaagtatcgtttggacttcaggcactttaacggtacca
ggaaatgaacgctttattacgcgtcagcttggcatttcagatagtgtccaagttatgcag
ttacaagcaccagcatcatattattctggtgcaaaagcgtttattgtcacagatatgcca
gatattcaacaggtgacgcaggcagattatattgaagcagtggcacatgcgattacacgc
acggttcgcatgacagaaggacgttgctttgtgttattcactgcccaagatatgttaaga
aaaacggttgagctgatacaagatagtgagcttctcgatgactatatgctctttgcacaa
ggtgtcacaggtggtagtcgaatgcgcattcttaaatcatttcagaagttcaaccaagca
gtgctatttggcacaaacagcttttgggaaggggtagacgttcctggtgatgcactttct
tctgtcattgttgtacgactaccgttttcttcaccagaggagccagtgttcaaggcacga
gccaaacatctaacattacaagggcacaactcctttacggagctatctttaccggaagca
attatgcgctttaagcaaggatttggccgtttaattcgatcatcccaagataagggcgca
tttattgtgctagatcgccgtattagcacaaaatcttatggcaaagaatttattcatgca
ttaccgcctatagatgtcaagaaactccaattgccagaattgctgaaggaattaagtaat
tggcagaaataa

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