Lysinibacillus varians: T479_08150
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Entry
T479_08150 CDS
T03062
Name
(GenBank) penicillin-binding protein 1A
KO
K05366
penicillin-binding protein 1A [EC:
2.4.99.28
3.4.16.4
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00550
Peptidoglycan biosynthesis
lgy01100
Metabolic pathways
lgy01501
beta-Lactam resistance
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
T479_08150
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
T479_08150
09180 Brite Hierarchies
09181 Protein families: metabolism
01003 Glycosyltransferases [BR:
lgy01003
]
T479_08150
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
T479_08150
Enzymes [BR:
lgy01000
]
2. Transferases
2.4 Glycosyltransferases
2.4.99 Transferring other glycosyl groups
2.4.99.28 peptidoglycan glycosyltransferase
T479_08150
3. Hydrolases
3.4 Acting on peptide bonds (peptidases)
3.4.16 Serine-type carboxypeptidases
3.4.16.4 serine-type D-Ala-D-Ala carboxypeptidase
T479_08150
Glycosyltransferases [BR:
lgy01003
]
Polysaccharide
Bacterial polysaccharide (excluding LPS)
T479_08150
Peptidoglycan biosynthesis and degradation proteins [BR:
lgy01011
]
Peptidoglycan biosynthesis and degradation
Glycosyltransferase/DD-Transpeptidase (Class A PBP)
T479_08150
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Transgly
Transpeptidase
CrgA
BUD31
Ig_J
Motif
Other DBs
NCBI-ProteinID:
AHN21422
LinkDB
All DBs
Position
complement(1715642..1718338)
Genome browser
AA seq
898 aa
AA seq
DB search
MSERRQTRGEHQKALAQKNKKKAPKAAKSSTKVWLKRIVLTILIIGIVGLVGGAGVFAYY
ASTAPELDEDLLKDPVSSEFYDKNGEIFATIGAENRKYVKYEDIPEDMINAILATEDVRF
FKHHGMDFYRLGGAILANFRDGFGSQGASTLTQQVVKNSFLQNEKKLKRKAQEAWLAFQL
ERKYSKEEIFEMYFNKMLMSGRIYGFGTAAQYFYGKELKDLSLDEEALLAGLVQRPNAYN
PLKNPELAEKRRNTVLGLMYQHGKITKAEMEEAKKVDVQAGLSDDATRQSFAGSKYDAFL
DIVINELEKNGDGSAMAEGIKVYTTLDPNAQQIVENIMNDDSNFPTEKIESGVAVIDTKT
GQIQAVGGGRNYGNRTFNYADDLKINHPGSTMKPLLDYGPAIEYLKWSTGKTLVDDPMKY
TGTNQTITNWDGKYLGAMTARKALYASRNVPAVKTFKEVGADKAKEFIGRLGIKAEIAYE
TDAIGGGDITISPIQMAASYAAFGNNGVYTDPYAITKIVYRDGKSTKDYTPKSTVAMEDY
TAYMVTDMLRDVVSNKPDASGTAANVSGLDIAGKTGTTNYSNDEFNKYNLPDTSVPDSWF
AGYTTNYSIAIWSGYEKRSDPITTWDERRLPQHLFKNIMKDLSANIETARFKKPSSVVEA
TIEVGSSPLKLASDYTPSELRQTELFVRGTEPTEVSNEYEAPELSTPYNVSASLDLAGQS
INIGWEHDAILDPETDEPMATTFEVSATREGGETVVLGTTDNKGLTVSNTLEDGNYTISV
VAIVDGTRSEPGTTSFEISSMPDEDLGTEDPDNPDIEQPTPPDQGNGEDNGNNNGNGNNG
NNGNNGNNNGGNNGNNSNNGNNGNNGNGTGNNGNDAGSQPPVTPTDPVVPNQENDSEQ
NT seq
2697 nt
NT seq
+upstream
nt +downstream
nt
atgagtgaacgtcgtcaaacacgcggagagcatcaaaaagctctcgctcaaaaaaataaa
aagaaagcgccgaaagcagcgaaatcttcgactaaagtttggttgaagcgtattgttcta
acaatacttattatagggattgttggtttagtcggcggggcaggtgtatttgcctattat
gcaagtacagctcctgaactggatgaagatttattgaaggaccccgtttcctctgaattt
tatgataaaaacggtgaaattttcgccacaatcggtgcagaaaatcgaaaatacgtaaaa
tacgaagacattcctgaagatatgattaacgccattctcgcaacagaagacgttcgcttt
tttaaacatcatggtatggacttttatcgtcttggtggtgcaatacttgccaacttccgt
gatggttttgggtcacaaggggcttcaacattaacacagcaagttgtcaaaaattcattt
ttacaaaatgagaaaaaattaaaacgtaaagcacaagaggcatggcttgctttccaactt
gaacgcaaatattcaaaagaagaaatatttgaaatgtacttcaataaaatgttgatgtcc
ggccgtatttatggctttgggacagcagctcaatatttctatggtaaagagttaaaagat
ttatcattggatgaagaagcgctactagctggcttagttcaacgtccaaacgcatacaat
ccattaaaaaatccagagctggcagagaaacgccgaaatacagttttgggcttaatgtac
cagcatggaaaaattacaaaagctgaaatggaagaagcgaaaaaagttgatgtgcaagca
ggtctttcagacgacgctacacgccaatcatttgctggttctaaatacgatgccttccta
gatatcgtcattaatgagctagagaaaaatggcgatggttctgctatggctgaaggtatt
aaagtttacacaacacttgatccaaatgcacagcaaattgtagaaaacatcatgaatgac
gatagcaatttcccaacagagaaaattgaatcaggcgttgctgttattgatacaaaaact
ggtcaaattcaagcagtcggcggtggacgaaattacggcaatcgtacatttaactatgca
gatgacttaaagattaaccaccctggttcaacaatgaagccattactcgattacggtcca
gcaattgaatatttaaaatggtcaacaggtaaaacacttgtcgatgatccaatgaaatat
acaggtacaaatcaaacgattacaaactgggatgggaaatatttaggtgctatgacagca
cgtaaagcgttatatgcttctcgcaatgtgccagctgttaaaacgtttaaagaagttggc
gctgacaaagcgaaagaatttatcggtcgcttaggaattaaggcagaaattgcttacgag
acagatgcaattggtggtggtgacattacaatatcacctattcaaatggcagcatcttat
gcggcatttgggaataacggtgtatatactgatccttatgccattacgaaaattgtttac
cgcgatggtaaatcaacgaaagactatacaccaaaatctacggttgccatggaagattac
acggcttatatggtcacagatatgttacgtgatgtagtcagcaataaaccagatgcatca
ggtacagccgcaaatgtttcaggcttagatattgctggtaaaacaggtacaaccaactat
tcaaacgatgagtttaataaatataatttaccagatacaagtgtgccagattcatggttc
gctggttacactactaactattcaatcgctatttggagtggatacgaaaaacgttcggat
ccaatcactacatgggatgaacgccgtttaccacaacatctatttaaaaatattatgaaa
gacctttctgcgaacattgaaactgcacgtttcaaaaagccaagctcggttgtagaagcg
acgattgaagtaggctctagcccactgaagctagctagtgattatactccaagtgaattg
cgccaaacagaactatttgttcgtggtacagaacctacagaggtttcaaatgagtatgaa
gcacctgaactttctacaccttacaatgtaagtgcaagtttagatttagcaggtcaatct
attaatattggctgggaacatgatgccattcttgacccagaaacagatgaaccaatggct
actacttttgaagtatctgctacacgcgaaggtggcgaaacggtagtgcttggaactact
gacaataaaggtttaactgttagcaacacattagaagatgggaattacacgatttctgtc
gtagcgattgtagatggtacacgcagtgaaccaggaacgacatctttcgaaatttcgagt
atgcctgatgaggatttaggtaccgaagatccagataatccggatatagaacaacctaca
ccgcctgatcaaggcaatggtgaggacaatggcaacaataacggcaatggcaataacggc
aataatggtaataatggtaataacaacggtggtaataacggcaataacagcaataacggt
aacaatggcaataatggcaatggtactggcaacaatggcaatgatgctggtagccaacct
cctgtaacaccaactgaccccgtagtgccaaaccaagagaatgatagtgaacaataa
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