Lysinibacillus varians: T479_08170
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Entry
T479_08170 CDS
T03062
Name
(GenBank) ATP-dependent helicase
KO
K06877
DEAD/DEAH box helicase domain-containing protein
Organism
lgy
Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09190 Not Included in Pathway or Brite
09194 Poorly characterized
99996 General function prediction only
T479_08170
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Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
MZB
Helicase_C
WHD_HRQ1
ResIII
Cas3-like_C_2
Motif
Other DBs
NCBI-ProteinID:
AHN21426
LinkDB
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Position
1720175..1722442
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AA seq
755 aa
AA seq
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MLSKKRTINALLNEWRYDDELKERIIHWHTLEGREAKYAPFPENLHPALVKALHARGITQ
LYTHQREAFDLAASHKSFTAVTPTASGKSYCYHLPVLQKILEDRNARAIYLFPTKALAQD
QKNDLNDLIEQSGEDILSYTYDGDTAPGIRQKVRKAGHIVMTNPDMLHSGILPHHTKWVS
LFENLKYIVIDELHTYKGVFGSHVAHVIRRLKRICEFYGSKPVFICTSATIKNPKELAEN
LTNDTHTLIADSGAPVGKKTFLFYNPPIIHKTFGVRRSAVLEVSDLAKRLYIAGIQTIIF
AKSRVRVEMIVTYLKELTRNKLQDESVRGYRGGYLPSERRVIERGLRDGTIQTVVSTNAL
ELGVDIGQLQACIMTGYPGNIASAWQQAGRAGRRQDEALIIYVAQSTALDQYVVDHPLFL
LGSDPEEARIYPENMLILMDHLKCAAFELPFTTSDTYGEYDIQELLDYLAEEGVVFKTSE
KWHWMSDRFPAHDISLRSASQENVVIIDMTVPARTKVIGEMDRHSAMTLLHEEAIYLHQG
IQYQVEKLDWEEKKAFVREVDVDYYTDANLAVEMKVLEEDRSRIYQGGTISFGDVGLVAQ
ATIFKKISLNDKQDNIGSGPIHLPPDEMHTSSSWLSFSNTLQWSEAELTEAMTGAAYAMN
AFIPLFIQCDASDVAVVPQVKATHNNLPTFFVYDKYPGGIGLSEKVYDLWEDLLTKTMNH
VVNCPCESGCPSCIGPQNALVNMKRKVKELLQILY
NT seq
2268 nt
NT seq
+upstream
nt +downstream
nt
atgttatcgaaaaaacggacaattaatgcattgttaaatgaatggcgctatgatgacgaa
ttaaaagagcgaattattcattggcacactttagaaggccgcgaagcgaagtacgcgcct
ttcccagaaaatttacaccctgcgcttgtgaaagcattacatgcccgaggaattacacaa
ttgtatacacatcaacgggaagcgtttgatttggcggcgagtcacaaatcctttactgcc
gtaacaccgacagcatcagggaaatcttactgctatcatttacctgtattacaaaaaatt
ttagaagaccgcaatgcacgggcaatttatctatttccaacgaaagcgttagcacaggat
caaaaaaatgatttaaatgacctgattgaacagagtggagaggacattttaagttatacg
tatgacggtgatacggctcctggtattcggcaaaaggtacggaaagcagggcatattgtg
atgaccaatccagatatgctgcattcaggtatactaccgcatcatacgaagtgggtatcg
ctctttgaaaatttaaagtatatcgttattgatgaattacatacatataaaggtgtattt
ggttcacatgtggcacatgtcattcgcagattgaaacgtatctgtgaattttatggtagt
aaacctgtgtttatttgtacgtcagcaacgataaaaaacccaaaagaattagctgaaaat
ttaacaaatgatacccacactttaattgctgattcaggtgctccagttggtaaaaaaaca
ttccttttttacaaccctccaattatccataaaacatttggtgttcggcgtagtgcggtt
ttagaggtaagtgatcttgccaaaagactttatatagctggcattcaaacgattattttt
gctaaaagtcgtgtgcgtgttgaaatgattgttacttatttgaaagaactgacgcgcaat
aagctacaagatgaatctgtgcgtggctatcgaggaggctatttaccgtcagagcgacgt
gttatagaacgtgggcttcgtgatggtacaattcaaaccgtagttagtacgaatgcgctg
gagctaggggtggatattggtcaattacaggcatgtattatgacaggctacccgggaaat
atcgcaagtgcatggcaacaagcgggccgagctggtcgacgtcaagacgaggcgcttatt
atttatgttgcacagtctactgcactagaccaatatgtggtagatcatccactattttta
ctagggagcgaccccgaggaggcacgtatatatcctgaaaatatgttgattttaatggat
catcttaaatgtgcggcgtttgagttaccgttcacaacaagcgatacgtacggagaatat
gacatacaagaactgctcgactatttagcagaagaaggtgttgtttttaaaacgagtgaa
aaatggcattggatgagtgatcgttttcctgcacatgatataagcctccgttcagcatct
caagaaaatgttgtaattattgatatgacagtacctgctcgtacaaaagtcattggggaa
atggatcgccatagtgctatgacattattacatgaagaagcaatctatttgcatcagggc
attcaatatcaagtagaaaaacttgattgggaagaaaaaaaagcttttgtgcgagaagta
gatgttgattattacacagacgcgaatttagcagtagagatgaaagtgcttgaagaagat
cgaagtcgcatctaccaaggtgggactattagctttggtgatgtaggattagtcgcacag
gctaccatctttaagaaaataagcttgaatgataaacaagataatattggctcgggtcca
atccatctaccaccagatgaaatgcatacaagctcgtcatggttgtcctttagcaataca
ctacaatggtctgaggcagaattaacagaggcgatgacaggtgcagcctatgcaatgaat
gcctttatcccgctattcatccaatgtgacgccagtgatgtagcagtagttccacaggta
aaggctacacataataatttgccaacgttttttgtgtacgacaagtatccaggcggcatt
ggtttaagtgaaaaagtgtatgatttatgggaagacttattgaccaagacaatgaatcat
gtcgtaaactgcccttgtgaatcgggctgcccatcctgtattgggcctcaaaatgcttta
gtaaacatgaaacggaaagttaaagagttactgcaaattttatattaa
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