Lysinibacillus varians: T479_13360
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Entry
T479_13360 CDS
T03062
Name
(GenBank) multidrug ABC transporter ATP-binding protein
KO
K18889
ATP-binding cassette, subfamily B, multidrug efflux pump
Organism
lgy
Lysinibacillus varians
Pathway
lgy02010
ABC transporters
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
T479_13360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgy02000
]
T479_13360
Transporters [BR:
lgy02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
T479_13360
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
SMC_N
AAA_22
nSTAND3
TsaE
NB-ARC
RsgA_GTPase
Pox_A32
DUF87
AAA_30
AAA_7
AAA_16
DO-GTPase2
MobB
MMR_HSR1
AAA_23
ATP-synt_ab
FtsK_SpoIIIE
NACHT
AAA_18
AAA_33
DO-GTPase1
AAA_14
cobW
Motif
Other DBs
NCBI-ProteinID:
AHN22189
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Position
complement(2674395..2676137)
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AA seq
580 aa
AA seq
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MFDVLSKLSWFFKQYWKQYTIAIVLLIIASGLEVIPPYLLGSIIDILTAGTMTTAILTKY
LLIFATIIVGGYVLNFVWQFRLFEGAINLEKMLRRNLMQHFLRMTPTFYEKNRTGDLMAR
ATNDLNAVSLTAGFGIMTLIDSTIYMGCIIFAMGYMISWKLTFFAMLPVPVMAILIQYLG
KIVHERYMKAQDAFGELNDSVLESVAGVRVVRAYVQEKKDEANFAAMSEVVYEKNMHTAK
INALFGPITKVGTGISYVVALGYGAHLVSTEAMSLGQLVTFTVYLGLAVWPIFAIGELIN
VMQQGNASLDRVQETLRYKADVQNSATPQAVATPNAIGFNDLSFQYPMSHVKNLERISLS
LKKGQTLGIVGKTGAGKTTFLRQLLREYPIGEGQLSIDGIDITAQTKEQLLDWIGYVPQD
HVLFSRTIRENILFGKEDATEEELKQAIHAAYFEKDLAHLPMGLETLVGEKGVSLSGGQK
QRVSIARALIKDPEILILDDSLSAVDAKTEAKIIENIQRERQDRTTIITTHRLSGIQHAD
MIIVLDEGQIVEQGTHEQLLSQQGWYKEQFDRQQLEGGAS
NT seq
1743 nt
NT seq
+upstream
nt +downstream
nt
atgtttgatgtattaagtaaattaagttggttttttaagcaatattggaagcaatatacc
atagctattgtactcttaatcattgcgagtggattagaggttattccaccgtatttacta
gggtctattattgatattttaactgcaggcacaatgacaacagctattttaacgaaatat
ttgttgatttttgcgactattattgttggcggttatgtcttgaattttgtttggcaattt
cgattatttgaaggtgccattaatttagagaaaatgttacgtcgcaatttaatgcaacat
tttttgcgtatgacaccgacattttatgaaaaaaatcgcactggtgatttgatggcacga
gctacaaatgatttaaacgccgtgtcactaactgcgggctttggaatcatgacactgata
gactcgacgatatatatgggctgtattatttttgcaatgggttatatgatttcgtggaag
ttaacgttttttgccatgttgccagtgcccgttatggctattcttattcaatatttaggg
aaaattgtgcatgaacggtatatgaaagcgcaggacgcctttggtgaattaaatgatagt
gtccttgagtcagtagcaggtgttcgagttgtaagggcatatgtacaagaaaaaaaggac
gaagcaaactttgcggcaatgagtgaagtcgtttatgaaaaaaatatgcatacggcaaaa
atcaacgctttatttggacccatcacgaaagtagggacagggattagttatgttgtggca
cttggctacggtgcacatttagtatcgactgaggcgatgtcattagggcaacttgtaaca
tttactgtctatttaggattagcggtttggccaatttttgcgattggggaacttattaat
gtgatgcagcaaggaaatgcctcattagaccgtgtacaggaaacgttacgctataaagcg
gatgtacaaaatagtgcaacaccgcaagctgtagcaacgccaaatgcaatcgggttcaac
gatttatctttccagtatccaatgagccatgtgaaaaacttggaacgtatttcattgtcg
ctaaaaaaggggcaaacacttggtattgttggaaagacaggtgctgggaaaacaaccttc
ttacgacagctgctacgtgagtatccaattggagaaggtcagttgtccattgatggcatt
gatattacggctcaaacaaaagagcagttactcgattggatcggctatgtgccgcaggat
catgtattattctcccgaacaattcgagaaaatattttatttggaaaagaagatgctaca
gaagaagagctgaaacaagcgattcatgcagcctattttgaaaaagatttagcccatctc
ccaatggggcttgaaacacttgttggagaaaaaggggtatcactttcaggaggtcaaaag
caacgtgtatcaattgcgcgggcactcattaaagaccctgaaattttaatccttgatgat
tcactttcagcggtagacgctaaaacggaagctaaaatcatcgaaaatattcagcgtgaa
cgacaggatcgaacgacgattattacaacccatcgattatcgggaattcaacatgccgat
atgattattgtgcttgatgaaggacaaatagtagaacagggaacacatgaacagctcctt
tcacaacaaggctggtataaagaacaattcgaccgtcagcagctagaagggggtgcctca
tga
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