Lysinibacillus varians: T479_13430
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Entry
T479_13430 CDS
T03062
Name
(GenBank) macrolide transporter
KO
K08217
MFS transporter, DHA3 family, macrolide efflux protein
Organism
lgy
Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgy02000
]
T479_13430
01504 Antimicrobial resistance genes [BR:
lgy01504
]
T479_13430
Transporters [BR:
lgy02000
]
Major facilitator superfamily (MFS)
Drug transporters
Drug:H+ antiporter-3 (12 spanner) (DHA3) [TC:
2.A.1.21
]
T479_13430
Antimicrobial resistance genes [BR:
lgy01504
]
Gene variants
Macrolide resistance genes
Transporters
T479_13430
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MFS_1
MFS_3
Motif
Other DBs
NCBI-ProteinID:
AHN22202
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Position
complement(2685634..2686821)
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AA seq
395 aa
AA seq
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MWGKRNVWIILLGEFVVGLGLWAGIIGNLAFMQKVVPSDFHKSLIISIGILAGLVVAPLA
GRLIDQSKKKTVIQFASVGRILSVFFMFIALYTNSVIWMILFLITLQIAAAFYMPALQSI
IPLVVKDKDLMTLNAWQMNARTISRIVGTAAAGLMLSYFELKWLYIVSLIVYIIMYFITN
SLKLDEAVNVSVNDKEKGRFKDVYPMLKEHPVVLMTLVLMLIPTLFLGSFNLVIMKITEM
HESTTISGLLYTVEGIGFMLGAAGLKYIAERVKIGTLLFGLALIIGLMELMLLLADSTFF
ALLTFGLFGFSVGCFFPTTMVIFQKQVPKEYHGRFFSFRNMIDSVVFQIVLLSTGMMLDL
IGLSGMGIVFGMISLSLTVTFFLFSKKRKVILHAH
NT seq
1188 nt
NT seq
+upstream
nt +downstream
nt
atgtggggaaaacggaatgtttggattattttattaggtgaatttgtagtaggtcttggc
ttatgggctggaattattggcaacttagcatttatgcaaaaagtcgtgccgtcagatttc
cataaatcattaattatttcaattggtatattagctggtcttgttgtcgcaccactcgca
gggcggttgattgaccaatcaaagaaaaaaacagttattcagtttgcgagtgtaggtcgt
attctaagtgtgttctttatgtttattgcactgtataccaactctgtaatatggatgata
ttatttttaatcacgttacaaattgcagcagccttttatatgcctgctttacagtccatt
ataccattagttgtcaaagataaagatttaatgactttgaatgcatggcaaatgaatgct
cgaacgatttcaagaattgtcggaaccgctgcagcgggcttaatgttaagctattttgag
ttgaaatggttatatattgtttcactaattgtgtatattatcatgtattttattacaaat
agtctaaagctagatgaagcggtaaatgtatctgtcaatgacaaggaaaaaggtagattt
aaggacgtatacccgatgctaaaggagcatccggtcgtattaatgacactcgttttaatg
ttaattccgacattatttttgggctcttttaatctggtcattatgaaaatcactgaaatg
catgagtccacgactatttccggtttattatatacagttgaaggaattggctttatgtta
ggggctgcggggctcaaatatattgctgagcgcgtcaaaatagggacattattattcgga
cttgcattgattattggcttaatggagctcatgttattgctagcggatagtacgttcttt
gctttattaacattcggactatttggtttttctgtcggttgctttttcccaacaacgatg
gtgatttttcaaaaacaagtaccgaaagaataccacgggcgattcttttccttccgcaat
atgattgactcggttgtgttccaaattgtgctgttgtcaacaggtatgatgctcgattta
atcggcttaagtggaatgggtattgtttttggtatgattagtttaagtttaaccgtaact
tttttccttttctcgaagaaaagaaaggtgattttacacgcacattaa
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