Lysinibacillus varians: T479_13830
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Entry
T479_13830 CDS
T03062
Name
(GenBank) ribonuclease Z
KO
K00784
ribonuclease Z [EC:
3.1.26.11
]
Organism
lgy
Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lgy03016
]
T479_13830
Enzymes [BR:
lgy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.11 tRNase Z
T479_13830
Transfer RNA biogenesis [BR:
lgy03016
]
Eukaryotic type
3'processing and CCA adding factors
3'processing factors
T479_13830
Prokaryotic type
T479_13830
BRITE hierarchy
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Ortholog
Paralog
GFIT
Motif
Pfam:
Anti-Pycsar_Apyc1
Lactamase_B_2
Lactamase_B
Lactamase_B_4
PDEase_II
Motif
Other DBs
NCBI-ProteinID:
AHN22276
UniProt:
A0ABY2TB89
LinkDB
All DBs
Position
complement(2767859..2768794)
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AA seq
311 aa
AA seq
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MQLHFLGTGAGMPSKERNTSALMVKLLEENGEMWLFDCGEATQHQILHTSLKPRKVTKIF
ITHLHGDHIFGLPGFLSSRSFQGGDEPLTIYGPAGLQQWVEQTFALSKTHLTYPLQFVEV
HEGVIYEDDKFTVRASELRHVVPCFGYRIEQKDLPGELLMDKVQSYGVPKGPLLGQLKKG
QDIALDNGTIIQAKDVVAPPKKGFTLAILGDTKYCEQAISLAEQADVVVHEATFDGSTTD
LAASYGHATNVEAAMVASKAGAKYLLLNHLSARFLPHDLPIFLAQAQAIFPQTFLTSDQA
VFYWSNNNLLF
NT seq
936 nt
NT seq
+upstream
nt +downstream
nt
atgcaactacattttttaggaacaggagcaggcatgccttcgaaggagcgcaatacgagc
gcattaatggttaagctattagaggaaaacggtgaaatgtggctttttgattgtggcgag
gcgacccagcatcaaattttgcatacgtctttaaagccacgtaaagtgacaaaaattttc
attacccatttacatggcgaccatatatttggtttacctggatttttgagctcacgttca
tttcaaggtggagatgagccgttgaccatttatggcccagccggcttacaacaatgggta
gagcagacatttgctttatcaaaaacccatttaacgtatccattgcaatttgtagaagta
catgaaggcgtcatttacgaagatgataaatttacggtgcgtgcaagtgaattacgccat
gtcgtgccctgttttggttaccgtatagagcaaaaggatttacctggtgagttactgatg
gacaaagtccaatcctacggcgtaccgaaaggaccattgcttggacagttaaagaaagga
caagatattgcacttgataatggcaccattattcaagcaaaggatgttgttgcacctccg
aaaaaaggctttacgcttgcgattttgggggatacaaaatattgtgaacaagccatttcc
ttggctgaacaagcagatgttgttgtgcatgaggcgacatttgatgggagtactacggat
ttagctgcgagctatggtcacgctaccaatgtagaagcagcgatggtagcaagtaaagct
ggtgcgaaatatttacttctgaaccatttaagtgcacgttttttaccacatgatttacca
atttttttagcccaagcacaagccattttcccacaaaccttccttacatcggaccaagcg
gttttttattggagtaataataatttgttattttag
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