Lysinibacillus varians: T479_14235
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Entry
T479_14235 CDS
T03062
Name
(GenBank) exodeoxyribonuclease VII small subunit
KO
K03602
exodeoxyribonuclease VII small subunit [EC:
3.1.11.6
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
T479_14235
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgy03400
]
T479_14235
Enzymes [BR:
lgy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.6 exodeoxyribonuclease VII
T479_14235
DNA repair and recombination proteins [BR:
lgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA exonucleases
T479_14235
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exonuc_VII_S
DUF6097
CDK5RAP3
MAS20
KNOX2
DUF1657
Motif
Other DBs
NCBI-ProteinID:
AHN22355
LinkDB
All DBs
Position
complement(2849452..2849685)
Genome browser
AA seq
77 aa
AA seq
DB search
MAKKQQTFAEAMTALEEIVRQLEQGDVPLENAIDLYKQGMELSQFCHSKLQHAEEQLISI
VQETGETTVFDPLKGEN
NT seq
234 nt
NT seq
+upstream
nt +downstream
nt
atggcgaagaaacaacaaacattcgcagaagcaatgacggcacttgaagaaatagtccgc
caattagagcagggtgatgtgccattagaaaatgctattgatttatataagcagggcatg
gagctttcacagttttgccatagtaaactacagcatgccgaggaacagttaatttcaatt
gttcaagaaacaggcgaaacaacagtatttgatccgctaaagggagagaactag
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