Lysinibacillus varians: T479_15535
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Entry
T479_15535 CDS
T03062
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy03030
DNA replication
lgy03430
Mismatch repair
lgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
T479_15535
03430 Mismatch repair
T479_15535
03440 Homologous recombination
T479_15535
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgy03032
]
T479_15535
03400 DNA repair and recombination proteins [BR:
lgy03400
]
T479_15535
Enzymes [BR:
lgy01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
T479_15535
DNA replication proteins [BR:
lgy03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
T479_15535
DNA repair and recombination proteins [BR:
lgy03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
T479_15535
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta_C
DNA_pol3_delta
Motif
Other DBs
NCBI-ProteinID:
AHN22578
LinkDB
All DBs
Position
complement(3093410..3094420)
Genome browser
AA seq
336 aa
AA seq
DB search
MISTVWNNIKKGQLAPVYLIIGEESYFIDETVKRLKEALGTEEEIEMTAFDLEELPVDVV
MDEADTIPFFSERKLVIAKNASFLKATEKGKEKIEHDVKRLEAWLANPSDFSVTVFIAPY
EKLDERKKVTKMMKEHALIVQAETPKEQDLAVWIQGLVKAQGNTITQSAIEQLVSMVGPN
MLQLQMEMEKLSLYVGEGGEITTMLVEDLVAKTLEQDAFKMLNAYFGHDPVAALSIYHDL
LRQKQEPIMLVGLLASNVRTMSNVFYLLKKGYHPQQIAKNLKIHPYRVKLMVEQRNRPSE
ESLLKALYQLAEVDLQLKTAGGNRERYLELFLLRQL
NT seq
1011 nt
NT seq
+upstream
nt +downstream
nt
atgatatcaacggtttggaacaatataaaaaaaggtcagcttgcacctgtatacttaata
attggtgaagaaagctattttatagatgaaacagtgaaacgtttaaaggaagccctcggc
acagaagaagaaattgaaatgacggcttttgacttagaggaattaccggtagatgtcgta
atggatgaagcggatacgattccatttttttcagagcgtaaactggtgattgctaaaaac
gcatcgtttttaaaggcaactgaaaagggaaaagaaaaaatcgagcatgatgtgaaacgt
ttggaggcatggcttgcaaatccttcagatttttctgtaacagtttttattgcaccatac
gaaaagctagatgaacgtaaaaaagtgacaaaaatgatgaaagagcatgcgctcattgtc
caagccgaaacgccgaaagaacaagatttagcagtatggattcaaggacttgtgaaagca
cagggcaatacgattacacaaagtgctattgagcagcttgtatcaatggttggaccgaat
atgctacagctacagatggaaatggagaaactatcgctctatgtaggtgagggcggagaa
ataacaacgatgctcgtagaagatttagtagcaaaaacgttagaacaggatgcctttaaa
atgttaaacgcatattttggacatgaccctgtagcggcattgtcgatttaccatgattta
ttgcgccaaaagcaggagccgattatgcttgtcgggcttcttgcttcgaatgtacggacg
atgtcgaatgtgttttatttgctgaaaaagggctatcatccacagcaaattgcaaaaaac
ttaaaaattcacccatatcgtgtcaagttaatggttgagcaacgcaaccgtccatctgaa
gaaagtttactgaaagctttatatcagttggcagaagtcgatttacagttaaaaacagca
ggaggaaaccgcgagcgatatttagaactatttttactacgccaactgtaa
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