Lysinibacillus varians: T479_15735
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Entry
T479_15735 CDS
T03062
Name
(GenBank) hypothetical protein
KO
K03581
exodeoxyribonuclease V alpha subunit [EC:
3.1.11.5
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
T479_15735
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgy03400
]
T479_15735
Enzymes [BR:
lgy01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
T479_15735
DNA repair and recombination proteins [BR:
lgy03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
T479_15735
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
AAA_30
AAA_19
HHH_RecD2
OB_YrrC
SH3_13
UvrD_C_2
AAA_11
Viral_helicase1
AAA_22
DEAD
AAA_12
TsaE
nSTAND3
AAA
AAA_16
PIF1
AAA_28
NACHT
SLFN-g3_helicase
UvrD-helicase
NTPase_1
AAA_17
UvrD_C
AAA_5
NPHP3_N
Endonuclea_NS_2
BAG6
AAA_18
AAA_25
Motif
Other DBs
NCBI-ProteinID:
AHN22617
UniProt:
A0ABY2TD46
LinkDB
All DBs
Position
complement(3129000..3131444)
Genome browser
AA seq
814 aa
AA seq
DB search
MTENLDLFELNKLFILGRPIVSIFHNVQNMYSIVRVKIQETNLQYEDKEIIVVGYFPQLQ
MDEQYRFTGTMRQHPKYGVQFQVETFTKEVPATEQGIVHYLSSDLFVGIGKKTAETIVEK
LGPNTIRLILEDPNVLDGVPRLSAEKKEVIHRTIEQNLGLERVMIQLNEWGFGPQLGMKI
YQTYRTETIDFLTENPYRLIEDVDGVGFFRADELGAKLGITGNHPDRIKAAILHILNTAA
LSDGHVFLDAEHVLPQVKDMLEQSQRQEIPYEAISKACIDLREENKIYGEETRLYLPSLY
FSEIGIASKIIALTERNSQAKHFSKDEIRKAIGETEALLSVTYAETQAFAIEQALNSAVM
ILTGGPGTGKTTVVRGIVEVYAKLHGLSLNPKEYAQKEEPFPIILCAPTGRAAKRLAEST
ELPAMTIHRLLGFTGQEKEEETEREVTGKLIIVDEMSMVDTWLAHQLLKSLHEDVQVVFV
GDQDQLPPVGPGQVLKDLLASQQIPTVELTDVYRQAEGSTIIELAHQIKRGTIPNDLTMK
TSDRSFIKASSEQVANVVTQVVKSAVTKGQEIRNIQVLAPMYKGPAGIDNLNKLIQALVN
PNDTGTRKELVFGDVTYRIKDKVLQLVNQPESNVFNGDMGEVISIIKAKETVEKQDLLVV
SFDGIEVTYQRSDLNQLTLAYCCSIHKSQGSEFQTVIMPVVRGYSKMLRRNLLYTGITRA
KNFLILCGEPDVLASGLQRTDDLQRFTSLRARLNPMEASNEVTLVEETQTQQNEENNQQE
DATTVLQLTVETLPSIHPMIGMDGISPYDFMDES
NT seq
2445 nt
NT seq
+upstream
nt +downstream
nt
atgacagaaaatctagatttatttgaactgaataagctatttattcttggacgtccgatt
gtctctattttccataatgttcaaaatatgtattctattgtgcgcgtgaaaattcaagaa
acaaatttgcaatatgaagataaagaaattattgtcgttggttatttcccacaattgcaa
atggacgaacaatatcgttttacaggaacgatgagacagcatccaaaatatggtgtacaa
tttcaagttgaaacctttacaaaagaagtgcccgcaactgagcaaggtatcgttcattac
ttatcgagtgatttatttgttggtattggaaaaaaaacggctgaaacaattgtagagaaa
cttggacccaatacaatccgtcttatattagaagacccgaatgtccttgatggtgtacca
cgactatctgctgaaaaaaaggaagttattcatcgtaccattgagcaaaatcttggattg
gaacgggttatgattcagttaaatgaatggggatttggcccgcagctcggtatgaaaata
tatcaaacatatcgtacagagacgattgattttttaactgaaaacccttatcgactcatt
gaagatgtggacggtgtcggtttctttcgggcagatgagcttggtgcaaaattaggtatt
acaggcaatcatcctgaccgtattaaggcggctattttacatattctaaatacagcagcg
ttatcggatggtcatgtatttttagatgcggaacatgtattaccacaagtgaaagatatg
ctggagcaaagtcaacgccaagaaataccatacgaagcaatttccaaggcatgtatcgat
ttgcgtgaggaaaataaaatctatggtgaagaaacgagactatatttgccatctctatat
ttttcggagattggtattgcctcaaaaataattgcgctaacggaacgcaatagtcaagcg
aagcattttagtaaagatgaaattcgcaaggcaatcggcgaaacagaagcattgttaagt
gtcacatatgcagaaacacaagcttttgcaattgaacaagcacttaattcagctgtcatg
attttaacaggtggtcctggtacaggaaaaacgacggttgttaggggcattgttgaagta
tatgccaaacttcacgggctttcactaaatccaaaggaatatgcgcaaaaagaagagcca
ttccctattattttatgtgcaccaacaggtcgtgcagctaaacgtctagctgagtctacg
gaactacctgcgatgactatccaccgcttattaggctttacaggtcaggagaaagaggaa
gaaacggagcgagaggttactggaaaactgatcattgtcgatgaaatgtccatggtagat
acatggcttgcccaccaattattaaaatcattacatgaggatgtacaagttgtttttgtt
ggcgatcaagatcagctaccgccagtaggtccaggacaagtgctcaaagatttacttgct
tcgcaacaaataccgactgttgaactgacagatgtttatcgtcaggcggaaggttcaacc
attattgaactcgcccatcagattaaacgtggtacaattccaaatgatctaacgatgaaa
acatcggatcgttcctttattaaagcttcttcagagcaagtggcaaatgttgtaacacaa
gttgtgaaaagtgcagtaacaaaagggcaagaaatccgaaatatccaagttttagcaccg
atgtataaaggaccagccggaatcgataacttaaataaattgattcaagcgcttgtcaat
ccgaatgatactggtacaagaaaggaacttgtctttggtgatgtaacgtatcgcataaag
gataaagtattacagcttgtaaaccagccagaaagcaatgtttttaatggagatatgggt
gaagtcattagtattattaaagcaaaggaaacggtggagaagcaggatttacttgtcgtg
tcttttgatggaattgaagtaacttatcagcgcagcgatcttaatcaattaacattggct
tattgttgctccattcataaatcacaaggttcagaatttcaaacggtgattatgccagtg
gtgcgtggctattcgaaaatgctacgtcgtaatttattatatactggtattacacgtgcg
aaaaatttcttaattttatgtggtgaaccagatgtgctagctagcggtttacaacgaaca
gatgatttacaacgcttcacgtctctgcgcgcacgacttaacccaatggaagcatctaat
gaggttacattagtggaggagacgcaaacgcaacaaaatgaagagaacaatcaacaagag
gatgctacgactgtgctacagctaacggtcgaaaccttaccatccatccatccaatgatt
ggaatggatggcatatctccatatgattttatggatgaatcataa
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