KEGG   Lysinibacillus varians: T479_17215
Entry
T479_17215        CDS       T03062                                 
Name
(GenBank) hypothetical protein
  KO
K02347  DNA polymerase (family X)
Organism
lgy  Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:lgy00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:lgy03400]
    T479_17215
DNA repair and recombination proteins [BR:lgy03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA polymerase
    T479_17215
SSDB
Motif
Pfam: DNA_pol_B_thumb HHH_8 PHP HHH_5 DNA_pol_B_palm HHH
Other DBs
NCBI-ProteinID: AHN22826
LinkDB
Position
complement(3393039..3394748)
AA seq 569 aa
MNKKTIIRTLEKIALYMELQGENPFKVSAFRKAAAALEGDERSLSEMEDVTKLKGIGKGT
AAVIEDLIETGESSLLKELQDIVPKGLLPLLKLPGLGGKKIAKLHQELGIDSAESLQAAC
EAGKVRELAGFAAKTEEKILKELANFANRSERLPIWQLEPVVLQIEALLGSMEEVTRFSV
AGSFRRASETSKDIDFIVVTEAIETVREKILSALAIQEVVAAGDTKISVILDLDDAVSVD
FRLVKDVEYATALHHFTGSKEHNVRMRQLAKTRGEKISEYGVEQADGSVLTFADEAAFFA
HFDLPFIPPSLRTGSTEFDRQSEVKDLVKLEDIVADLHMHTTWSDGAYSVAEMGEALISR
GYQYSVITDHSQYLKVANGLTPARLVKQRAEIDAFNEAHPDFYLYAGTEMDILPDGSLDF
DDEVLRKLDFVIASIHSSFTQSQDKIMARLHTAMQNPYVHMIAHPTGRIIEDRAGYNPNI
AQLIEWAKEYGKILELNANPYRLDLCVEHLEMAVAAGVPVAINTDAHDIAHLRFMDIGVR
YANRAWLKKDMIVNTWTREQFESFIRRNK
NT seq 1710 nt   +upstreamnt  +downstreamnt
atgaacaaaaaaacaattattcgtacgttagaaaaaattgcattatatatggagttacaa
ggtgaaaatccgtttaaagtatccgcattccgcaaagctgcagcagcattagaaggtgat
gagcgctcgcttagtgagatggaggatgtaacaaagcttaaaggaatcggtaaaggtaca
gccgctgttattgaagacttaatcgagacaggtgaatcgagtctgcttaaagaattacaa
gatattgtaccgaaaggattactgccattactgaagttaccaggcttaggtggcaaaaag
attgcgaagcttcaccaagagctaggcatagactctgctgaaagcttacaagctgcatgt
gaagcgggtaaagtgcgcgagctagcaggctttgccgccaaaacagaagaaaagatttta
aaggaactagctaattttgctaatcgttcagaacgtttgccaatttggcagcttgagcct
gtcgttttacaaattgaagcacttctcggtagtatggaggaagtgacgcgtttttccgta
gcaggcagtttccgtcgtgcatctgaaacaagtaaagatattgatttcattgttgtaact
gaagcaatagagacagtacgagaaaaaatattgagtgcactcgctattcaagaggtagtg
gcagcaggagatacaaaaatttccgttattttagatttagatgatgctgtaagtgttgat
tttcgattagtaaaggatgttgagtatgccacagccttgcaccattttacaggttcaaaa
gaacataacgttcgcatgcgccaacttgccaaaacacgtggggaaaaaattagtgagtat
ggtgtagagcaagcagatggttctgtgctgacatttgcagacgaagcggcattttttgcc
cattttgatttgccatttatcccccctagcttacgaacagggtcaacagagtttgaccgg
caaagtgaagtcaaggatttagttaagctagaggacattgtcgctgatttgcatatgcat
acaacatggtcagatggcgcgtactctgtggctgaaatgggtgaagcgctaatttcccgt
ggttatcaatatagtgttattaccgatcactcacaatatttaaaagtggcgaatggtttg
acacctgcacgattagtgaagcaacgagctgaaattgacgcttttaacgaagcgcatcct
gacttttatttatatgcaggcacagaaatggatattttaccagatggttcgttagatttt
gatgatgaagtactgcggaaattggatttcgtgattgcctccattcattcgagttttaca
cagtcacaggataaaataatggcgcgattacataccgcgatgcaaaatccgtatgtacat
atgattgctcatccaacggggcgcattattgaagaccgggctggttataatccaaatatc
gcgcagttgattgaatgggcaaaggaatatggtaaaattttagagttgaacgccaatccc
tatcgtttagatttatgcgttgagcatttagaaatggctgttgcagcaggtgtaccagta
gcgattaataccgatgcgcatgatatcgcgcatttacgttttatggatattggtgtgcgc
tatgcaaatagggcatggctgaaaaaagatatgattgtcaatacatggacgcgcgaacag
ttcgagtcgttcattcgacgaaataaatag

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