Lysinibacillus varians: T479_17850
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Entry
T479_17850 CDS
T03062
Name
(GenBank) diguanylate cyclase
KO
K01439
succinyl-diaminopimelate desuccinylase [EC:
3.5.1.18
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00300
Lysine biosynthesis
lgy01100
Metabolic pathways
lgy01120
Microbial metabolism in diverse environments
lgy01230
Biosynthesis of amino acids
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
T479_17850
09180 Brite Hierarchies
09181 Protein families: metabolism
01002 Peptidases and inhibitors [BR:
lgy01002
]
T479_17850
Enzymes [BR:
lgy01000
]
3. Hydrolases
3.5 Acting on carbon-nitrogen bonds, other than peptide bonds
3.5.1 In linear amides
3.5.1.18 succinyl-diaminopimelate desuccinylase
T479_17850
Peptidases and inhibitors [BR:
lgy01002
]
Metallo peptidases
Family M20
T479_17850
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Paralog
Gene cluster
GFIT
Motif
Pfam:
Peptidase_M20
M20_dimer
Peptidase_M28
Motif
Other DBs
NCBI-ProteinID:
AHN22948
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All DBs
Position
complement(3530651..3532054)
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AA seq
467 aa
AA seq
DB search
MDWLQVAKERQDELIQELQELVQINSVLDEKTITADVPFGEGPLKALEWLLAKGKAQGLQ
TKNVDNYAGHIEMGQGEELLGILCHVDVVPVGDESNWTYPPFSGTIADGKLFARGAIDDK
GPTVAAWMAMKLVKDAGIQLNKRVRMIIGTDEETGFRCVDHYFKNEEMPTIGFAPDADFP
LINAEKGIAALVLSQKQIGDATKEQLLLFNAGKRSNMVPDFAKATVQFVSSPFEQNFQTF
LSKNQLEGSLLMEGSHYIITIKGKAAHAMEPEKGVNAAVYLAAFLQQELTTEGSKQFVDF
IVDVFHQDHYGHALALQYEDDMSGQTTLNPGIVTYDATQGGNIVISFRYSVTYPFDDKIT
EAQRLAADKGFSLDVQENSKPHYVSEDDPLIQTLAGVYRRQTGDNETPLLSTGGGTYARV
LKKGVAFGMLFPGDPDVMHRADEYVIVDKLVQAAAIYAEAIAELAGK
NT seq
1404 nt
NT seq
+upstream
nt +downstream
nt
atggattggttacaggttgcaaaagaaagacaagatgaattaattcaagagttgcaagag
cttgtgcaaattaatagtgtactggatgaaaaaacaataactgcggatgtgccttttggt
gaaggaccgttaaaggcattggaatggttgttagcgaaagggaaagcacaagggttacaa
acaaaaaatgttgataattatgctggacatattgaaatgggccaaggtgaagagttactg
ggtattttatgtcacgtagatgttgtccctgtaggtgatgaatcaaactggacgtaccca
ccttttagcggcacgattgcagatggaaaattatttgcgcgcggtgctattgacgataag
ggcccaacagttgctgcatggatggcaatgaaacttgtaaaagatgcaggtattcaatta
aacaaacgtgtgcgtatgattatcggaacagatgaagaaacaggcttccgctgtgtcgac
cactattttaaaaacgaggaaatgcccacaatcggtttcgctcctgatgcggatttccca
ctgattaatgccgaaaaaggcattgctgcgcttgtgttgtcccaaaagcagattggggat
gcaacgaaagaacagctactactatttaatgctggaaagcgttcaaatatggtacctgat
tttgcgaaagcgacagttcaattcgtatcttcaccgttcgaacagaattttcaaacattt
ttaagtaaaaatcagctagaaggctctttattaatggagggttctcactatataataact
atcaaaggaaaagcagcccatgcaatggaacctgaaaaaggtgtcaatgcagctgtttac
cttgcagcatttttacaacaagagttaacgactgaaggaagtaagcaatttgtcgatttt
atcgttgatgtattccatcaggatcattatggtcatgcactagcattacaatatgaagat
gacatgtccggacaaacaacattaaatcctggtattgtaacttacgatgcaacgcaaggt
ggcaacattgttattagtttccgctactctgtaacgtatccatttgatgacaaaataaca
gaagcgcaacgattagctgcagacaaaggattttcacttgatgttcaagaaaactcaaaa
cctcattatgtcagtgaggatgatccgttaatccaaacgttagctggtgtttatcgccga
caaacgggcgataacgaaacacctttactttcaacaggcggtggaacgtatgcacgcgtc
ttgaaaaaaggtgtggcattcggcatgcttttccctggtgatccagatgtcatgcatcgt
gcggatgaatatgtaattgttgataaattagtacaagctgctgctatttatgcagaagcc
attgcagaattggctgggaagtaa
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