Lysinibacillus varians: T479_17870
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Entry
T479_17870 CDS
T03062
Name
(GenBank) RNA pseudouridine synthase
KO
K06183
16S rRNA pseudouridine516 synthase [EC:
5.4.99.19
]
Organism
lgy
Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
lgy03009
]
T479_17870
Enzymes [BR:
lgy01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.19 16S rRNA pseudouridine516 synthase
T479_17870
Ribosome biogenesis [BR:
lgy03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
T479_17870
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
S4
SYY_C-terminal
Motif
Other DBs
NCBI-ProteinID:
AHN22952
UniProt:
A0ABY2TDT7
LinkDB
All DBs
Position
complement(3535689..3536402)
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AA seq
237 aa
AA seq
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MRLDKLLANMGYGSRKEVKQLLKQKAVSVDGTYVKDAAMHVDPEQQSVVVFGERVVYTEF
VYYMMNKPPGVISATEDLRDETVIDLLDPLHQHFQPFPVGRLDKDTEGLLLLTNDGVLAH
NLLSPKKHVPKVYYAKIEGIVTQDDGEQFARGVELDDGYVTKPGKLVILKSAPQSEIELT
IQEGKFHQVKRMFEAVGKRVIYLKRLSMGSLQLDESLALGEYRELTPEELAGLQNRE
NT seq
714 nt
NT seq
+upstream
nt +downstream
nt
atgcgtttagataaattattagccaatatgggctatggctcacgaaaggaagttaagcaa
ctcctaaaacaaaaggccgtttctgttgatggcacgtatgtaaaagatgcggcaatgcat
gttgatccagaacagcaaagtgttgtcgtattcggtgaacgtgttgtatatacagagttt
gtgtattacatgatgaataagccaccaggtgttatttctgctacagaagatttacgagat
gaaactgtcattgacttattagacccactacatcaacattttcaaccattcccagtcggt
cgtttagataaagatacagagggcttgttactattaacgaatgatggtgttttggcccat
aacttactttctccaaagaagcatgtacctaaggtgtactatgctaaaatagaggggatt
gttacgcaagatgatggagaacaatttgcgcgtggtgtcgaactagatgatggctacgta
acaaagccaggcaagcttgttattctgaaatctgctccgcaatcagaaattgaattgacg
attcaagaaggtaaattccatcaggtaaaacggatgtttgaagcagtaggtaaacgtgtc
atctacttaaaacgcctttctatggggagcttacaacttgatgaaagcttagcattaggt
gaatatcgcgagttaacgccagaagaattagcaggcttacaaaatagagagtaa
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