Lysinibacillus varians: T479_18725
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Entry
T479_18725 CDS
T03062
Name
(GenBank) cysteine desulfurase
KO
K11717
cysteine desulfurase / selenocysteine lyase [EC:
2.8.1.7
4.4.1.16
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00450
Selenocompound metabolism
lgy01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09106 Metabolism of other amino acids
00450 Selenocompound metabolism
T479_18725
Enzymes [BR:
lgy01000
]
2. Transferases
2.8 Transferring sulfur-containing groups
2.8.1 Sulfurtransferases
2.8.1.7 cysteine desulfurase
T479_18725
4. Lyases
4.4 Carbon-sulfur lyases
4.4.1 Carbon-sulfur lyases (only sub-subclass identified to date)
4.4.1.16 selenocysteine lyase
T479_18725
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Gene cluster
GFIT
Motif
Pfam:
Aminotran_5
Cys_Met_Meta_PP
DegT_DnrJ_EryC1
Beta_elim_lyase
Aminotran_1_2
SelA
KYNU_C
Met_gamma_lyase
Motif
Other DBs
NCBI-ProteinID:
AHN23064
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Position
complement(3673684..3674913)
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AA seq
409 aa
AA seq
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MINKDIKSYFPILNQQVNGHPLVYLDSAATSQKPIQVIEAIKHYYEFDNSNVHRGVHTLG
NRATDKYEGAREKVRNFINAKTTEEIIFTRGTTTALNTVASSYGRANVEQGDEIVITHME
HHSNIIPWQQLAKEKNATLKYIDLEADGTLDLEKVRATITPKTKIVSVSMASNVLGTINP
IKEIAKIAHANGAVMVADGAQAAPHMKMDVQDLDVDFLGFSGHKMCGPTGIGVLYGKKEH
LEKMEPIEFGGEMIDFVGLHDSTWKELPWKFEGGTPIIAGAIGLGAAIDFLTEVGLDNIA
KHEHALVGYAMDQLETIDGLKIFGPRDPMKRCGLVTFNLDDVHPHDVATVLDMNGIAVRA
GHHCAQPLMKCLQQVATARASFYLYNTEEDIDRLVAGLRSAKEYFGDVF
NT seq
1230 nt
NT seq
+upstream
nt +downstream
nt
atgatcaataaagacattaaaagctatttcccaatattaaatcaacaagtaaatggtcac
ccgcttgtttatcttgatagtgcagcaacatctcaaaagcctattcaagtaattgaagca
attaagcattactatgaatttgataactcaaatgttcaccgaggtgtgcatacattgggg
aatcgtgcgactgacaaatacgagggtgctcgtgaaaaggttcgcaatttcattaatgcg
aaaacgacagaagaaattattttcactcgcggtacaacaactgcgttaaatacagtagct
tctagttatggtcgtgcaaatgttgagcaaggtgatgaaattgtcatcacacatatggaa
caccattctaatattataccttggcaacagcttgcaaaagaaaaaaatgcaacattaaag
tacattgaccttgaggcagatggaacgcttgaccttgaaaaggttcgagcaacaattacg
ccgaaaacaaaaatcgtgtctgtatccatggcatcaaatgttctcggtacgattaatccg
attaaagaaattgctaaaattgcacatgccaatggtgcagttatggtagcggatggtgca
caagcagcaccgcatatgaaaatggatgtgcaagacctagatgtcgatttcttaggattt
tcaggacataaaatgtgcggaccgactggaataggtgtactatatggtaaaaaagagcac
cttgaaaagatggagccaattgaatttggtggcgaaatgatcgactttgttggattacat
gattcaacgtggaaagaattgccgtggaaatttgaaggtggtacacctattattgcagga
gcaattggtttaggagctgctatcgatttcttaactgaagtagggttagacaatatcgca
aagcatgaacatgcgcttgtaggctatgcgatggatcagcttgaaacaattgacggactt
aaaatttttggcccacgcgatcctatgaagcgttgtggacttgttacatttaacttagat
gatgtacatccgcatgatgttgcaactgttcttgacatgaatggcatcgctgttcgtgcc
ggacatcattgtgcgcagccactaatgaaatgtctccaacaagtagcgacagcgcgagca
agcttttatctgtacaatacggaggaagatattgaccgcttagttgctgggttgcgttca
gcgaaggagtattttggcgatgtcttttaa
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