Lysinibacillus varians: T479_19435
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Entry
T479_19435 CDS
T03062
Name
(GenBank) long-chain fatty acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00061
Fatty acid biosynthesis
lgy00071
Fatty acid degradation
lgy01100
Metabolic pathways
lgy01212
Fatty acid metabolism
lgy02024
Quorum sensing
lgy04146
Peroxisome
Module
lgy_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
T479_19435
00071 Fatty acid degradation
T479_19435
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
T479_19435
09145 Cellular community - prokaryotes
02024 Quorum sensing
T479_19435
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
lgy01004
]
T479_19435
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgy04147
]
T479_19435
Enzymes [BR:
lgy01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
T479_19435
Lipid biosynthesis proteins [BR:
lgy01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
T479_19435
Exosome [BR:
lgy04147
]
Exosomal proteins
Exosomal proteins of breast milk
T479_19435
Exosomal proteins of breast cancer cells
T479_19435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
AHN23175
UniProt:
A0ABY2T5B5
LinkDB
All DBs
Position
complement(3838328..3839875)
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AA seq
515 aa
AA seq
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MNLVSCVRQQAAEQPEKIAYHFMGKDTSYGEFEHTVGRFAQGLQDLGVQKGDHVAFLLGN
TPHYLIALYATMRLGATAIPVNPIYTPDEISYILRNGDVKAVIALDALLPLVEVGVQAFP
EVVTFVVCETTADVAEKIEALSEEAKAKTHLFSHIVASATGSLEPVDIAQDDTAIILYTS
GTTGNPKGAMLTHGNVYSNARDVSTYLGYRANDRIIATLPVFHVFALTVVVNAPLISGAT
VLLTPRFSPSEIFTLAREQQATVFAGVPTMYNFLYLLPEGKPEDFSTIRLAISGGASLPV
ALLHNFEKKFNVRVSEGYGLSEASPVTCFNPLDRERKAGSIGTSINNVENRVVDVNGIDV
PVGEVGELVVRGPNVMKGYYKMPEETAMAIRDGWLYTGDLAKVDDEGYFYIVDRKKDMII
VGGYNVYPREVEEVLFAHDNIVEAAVVGYPDPNFGEAVHAYIVLKEVAATTTDDILAYCA
KHMVKYKVPKVVEILDELPKNTTGKILRRTLKEKV
NT seq
1548 nt
NT seq
+upstream
nt +downstream
nt
ttgaatttagtttcatgtgtccgtcaacaagcagcagagcagccggaaaaaattgcgtat
cattttatggggaaagatacttcatatggggaatttgagcacacagttggccgctttgca
caggggttacaagatttaggggtacaaaaaggggaccatgtggcgtttttactcggcaac
acgccacattatttaatcgctttatatgcaacgatgcgtctaggagcaacagcaattcct
gtgaatccaatctatacgccagatgagatatcttatattttacgaaatggcgatgttaag
gcggttattgcacttgatgcattgcttccattagtagaagtaggtgtacaggcattccca
gaagtagtgacatttgtcgtttgtgaaacaacagcagatgtagctgaaaaaatagaggct
ttatcggaagaggcaaaagcgaaaacacatttattttcgcatattgttgcaagtgccact
ggatcgttagaaccggtagacatcgcacaagatgatacggctattatattatacacttcg
ggaacaacaggcaatccaaaaggtgccatgctgacacacggaaatgtttattcaaatgca
cgtgatgtctcaacgtatttagggtatcgagcaaatgatcgaattattgcaacattacca
gttttccacgtgtttgcattaacagtcgtagtcaatgcaccattgattagtggagcaacc
gttttacttacacctcgctttagcccaagtgaaattttcacattggcgagagagcaacag
gcaactgtctttgcgggtgtgcctacgatgtataactttttgtatttattaccagaaggc
aaaccggaagatttttcaacaattcgtttagccatttcagggggcgcatcattacctgtt
gcactattacataatttcgagaagaaatttaatgtacgtgtatcagagggctatggttta
tcagaagcttcaccggtaacatgtttcaatccattagaccgtgagcgaaaagctggctct
atcggtacatcgattaataacgttgaaaatagagtggtcgatgttaatggtatagatgtt
cctgtcggtgaagttggtgagttagttgttcgtggtccaaatgtcatgaaaggctattat
aaaatgcctgaagaaacggcgatggccattcgtgatggttggctttacacaggggatctt
gcaaaagttgatgacgaaggttatttctatatcgtcgatcgcaaaaaggatatgattatt
gttggcggttataatgtttatccgagagaagtagaggaagttctatttgctcatgataat
atcgtagaggcggcagttgttggctacccagaccctaattttggtgaagcagtacatgca
tatatcgtactcaaggaagtagcggctacgacaacagatgatattttggcatattgtgca
aagcatatggtgaaatataaagtgccaaaagttgtggaaatattagatgagcttcccaaa
aatacaacaggtaaaattttgcgtcgtactttaaaagaaaaagtataa
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