Lysinibacillus varians: T479_19625
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Entry
T479_19625 CDS
T03062
Name
(GenBank) 3-phosphoglycerate dehydrogenase
KO
K00058
D-3-phosphoglycerate dehydrogenase / 2-oxoglutarate reductase [EC:
1.1.1.95
1.1.1.399
]
Organism
lgy
Lysinibacillus varians
Pathway
lgy00260
Glycine, serine and threonine metabolism
lgy00270
Cysteine and methionine metabolism
lgy00680
Methane metabolism
lgy01100
Metabolic pathways
lgy01110
Biosynthesis of secondary metabolites
lgy01120
Microbial metabolism in diverse environments
lgy01200
Carbon metabolism
lgy01230
Biosynthesis of amino acids
Module
lgy_M00020
Serine biosynthesis, glycerate-3P => serine
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09100 Metabolism
09102 Energy metabolism
00680 Methane metabolism
T479_19625
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
T479_19625
00270 Cysteine and methionine metabolism
T479_19625
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lgy04147
]
T479_19625
Enzymes [BR:
lgy01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.95 phosphoglycerate dehydrogenase
T479_19625
1.1.1.399 2-oxoglutarate reductase
T479_19625
Exosome [BR:
lgy04147
]
Exosomal proteins
Exosomal proteins of other body fluids (saliva and urine)
T479_19625
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
2-Hacid_dh_C
2-Hacid_dh
PGDH_inter
ACT
ACT_AHAS_ss
KARI_N
ACT_4
Lys_Orn_oxgnase
NAD_binding_2
Motif
Other DBs
NCBI-ProteinID:
AHN23213
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Position
3879169..3880776
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AA seq
535 aa
AA seq
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MTTATKTINVFIADPLSEDGIFPLRQEKDLNLNVIIDTGLAPEELIAKIADIDVLLVRSQ
TTVTREVIEAAKNLKLIGRAGVGVDNIDLAAATEHGIIVVNAPDGNTNSAAEHTIAMMTS
LARHIPQAFNTLKNGKWDRKSYVGVELKNKTLGVVGFGRIGVEVAYRAKGQRMNIMAYDP
FLTDERANELGVTKSTVEEICAAADFITVHTPLLPETRNLINKEKFAMMKDGVRIINCAR
GGIINEDDLYDAIVEGKVAGAALDVFVSEPATDHKLLTLPQVIATPHLGASTIEAQESVA
VDVSNDIIKFYKTGTVTNPVNMPSIPKELLAQVEPFFELAEKLGSFLSQVTVEPVKEINL
SYAGEVANYDVRPLTSNALKGLLAKNHGNHVNDVNARYLSERIGMKINEHKTTTAKGFTS
LITIEVKTANETHTVAGTLLNGLGARIVKVENYVVDVVPEGHLLYIKNTDKPGAIGRVAT
KLAEKDINIATMQVGRAEVGGTAVMMLTIDNVVTEEDLKFVAQLENIDEVKAIDL
NT seq
1608 nt
NT seq
+upstream
nt +downstream
nt
atgacaactgcaacaaaaactattaacgtatttatcgctgacccactaagtgaagatggt
attttcccactacgccaagaaaaagatttaaacttaaacgttattattgatactgggcta
gcaccagaggagttaattgcaaaaatcgctgatattgacgtattacttgtgcgttctcaa
actactgtgacacgtgaagtaatcgaagctgcaaaaaatttaaaattaattggacgtgct
ggtgtaggtgttgacaacattgacctagctgctgcaacagagcatggtattatcgtagtc
aatgctccagatggtaacacaaactctgcagctgaacatacaatcgccatgatgacttct
cttgctcgtcacattccacaagctttcaacacactgaaaaacggtaaatgggaccgtaaa
tcatatgttggggttgagcttaaaaataaaacattaggtgttgttggcttcggtcgtatc
ggtgtagaagtagcttaccgtgcaaaagggcaacgtatgaatattatggcgtatgatcca
ttcttaactgatgaacgtgcaaatgaattaggtgtaacaaaatctactgtagaagaaatt
tgtgctgctgctgatttcattacagtacacacaccattacttcctgaaacacgtaacctt
attaacaaagaaaaattcgctatgatgaaagatggcgtacgtatcattaactgtgcacgt
ggtggtatcatcaatgaagacgatttatatgatgcgattgtagaaggcaaagtagcaggt
gcagcactagacgtattcgtttctgaaccagcgactgatcataaattactaactttacca
caagtgattgcaacacctcacttaggtgcatctacaattgaggcgcaagaatctgtagcc
gttgacgtttctaatgacattattaaattctacaaaacaggtacagtaacaaacccagtt
aatatgccttcaattccaaaagaacttcttgcacaagtagaacctttctttgaattagct
gaaaaacttggttcattcttatcacaagttacagtagagcctgtaaaagagattaactta
tcttatgctggtgaagtagcaaattacgacgtacgtcctttaacttctaatgcattaaaa
ggattactagctaaaaaccacggcaaccatgtcaatgacgttaatgctcgctacttatct
gaacgtatcggcatgaaaattaacgaacataaaacaactactgctaaaggcttcacaagc
ttaattacgattgaagtaaaaacagcaaatgaaacacatacagtagctggtacattacta
aatggccttggcgcacgtattgtaaaagtagaaaactatgtagtagacgttgtaccagaa
ggacaccttctttacattaaaaacacagataaaccaggtgcaattggacgtgtggcaacg
aaactagctgaaaaagacatcaacatcgctacgatgcaagtgggacgcgctgaagttggc
ggaacagctgttatgatgctaacgatcgataatgtagtgacagaagaagatttaaaattc
gttgcacaacttgaaaacatcgacgaagtaaaagcaattgacctttaa
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