Lysinibacillus varians: T479_20360
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Entry
T479_20360 CDS
T03062
Name
(GenBank) peptide ABC transporter substrate-binding protein
KO
K02032
peptide/nickel transport system ATP-binding protein
Organism
lgy
Lysinibacillus varians
Pathway
lgy02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
T479_20360
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lgy02000
]
T479_20360
Transporters [BR:
lgy02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Peptides/nickel transporter
T479_20360
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
oligo_HPY
AAA_21
SMC_N
AAA_22
PRK
AAA_13
AAA_16
AAA
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AHN23311
UniProt:
A0A806LMA7
LinkDB
All DBs
Position
complement(3992577..3993557)
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AA seq
326 aa
AA seq
DB search
MSKVLLKVEGLKKYFPIRKGFLNTQVGDVKAVDNVSFEVFEGETLGIVGESGCGKSTTGR
LLMRLLEPTAGNIEFGGKMLSSLSNSEMRKARRDIQMIFQDPYASLNPRHSIGKILEEPL
IVHGMGNSKERKQKVIELLKIVGLNEYHVKRYPHQFSGGQRQRIGIARALMTNPRLIIAD
EPVSALDVSIQAQVLNLMQSLQKELKLTYIFISHDLGVVRHISNRVGVMYLGKLVELTAS
ENLYAEPLHPYTQALLSSVPVPDPTFEREQLIISGDIPSASNPPSGCAFHTRCPFKKAQC
SSVVPNMQEVKPGHYVACHLYDAIQH
NT seq
981 nt
NT seq
+upstream
nt +downstream
nt
atgtcgaaagtgctattgaaagttgaagggttaaaaaaatactttccaattcgcaaagga
ttcttgaatacgcaagttggcgatgtaaaagctgtggacaatgtatcctttgaagtattc
gaaggggaaacattagggattgtgggcgaatcaggatgtggtaagtcaacgacaggtcgc
cttttaatgcgcttgctcgaaccgaccgcagggaacattgaattcggtggcaaaatgctt
tcttccttatcgaatagtgaaatgcggaaagcacgaagggatatccaaatgattttccaa
gacccctatgcttcacttaatccacgccattcgattggcaagattttagaggaaccactc
attgtgcatggaatgggcaattcaaaagaacgcaagcagaaagtaattgagctgcttaaa
attgttggcttaaatgaatatcatgtaaaacgctatcctcatcaatttagtggaggacag
agacaacgcattggtattgcgcgagcgctgatgaccaacccgcgtttaattattgcggac
gaacctgtttctgcgttagatgtatcaattcaggctcaagttttaaacctaatgcaatct
ttgcaaaaggaactaaagcttacctatatttttatctcacatgacttaggtgttgtacgc
catattagtaatcgtgttggggttatgtatttaggcaaattagtagagttgaccgcaagt
gaaaatttatatgcagagccgctccacccatatacgcaggcattattatcttctgttcct
gtgcctgatccaacttttgaacgtgagcagcttattatatctggagatattccgagtgca
tccaatccgccgagtggttgtgcattccatacaaggtgtccgtttaagaaggcacaatgc
tcaagcgttgtaccgaacatgcaagaagtgaagccgggtcattatgttgcttgtcatctt
tatgatgcgattcaacattga
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