Lysinibacillus varians: T479_23200
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Entry
T479_23200 CDS
T03062
Name
(GenBank) deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lgy
Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgy03400
]
T479_23200
Enzymes [BR:
lgy01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
T479_23200
DNA repair and recombination proteins [BR:
lgy03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
T479_23200
Prokaryotic type
T479_23200
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Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
AHN23793
UniProt:
A0ABY2TBZ8
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Position
4558709..4560136
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AA seq
475 aa
AA seq
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MNKKIIVLFRNDLRLDDHPALWHAAKSGVILPVYIHNEQFSMCNTAQSFWTYYSLQNLQA
TLDDYNTQLILRKGEVISEVLQLAVDTEADAVYFNERFLPTERNEDEQLTNILQANNIEV
KAFYGDSLFNLSNIQNQQNKPYAIFTSFYKRCLQEPVRKPLGQPTNIRAFPTKVSSLALE
QLQLLHGNWYHKFHHYWNPGIDGAMEQWELFVEQGLFGYQDKRDYPAKETISKMSPFLAV
GNISIRLLWATCQELIDDEDNAIFSQQIESFLRQLIWREFSIYQLLNYPTFSTDSLRSNF
QHFEWEPHSIRLEAWKTGQTGYPLVDAGMRELWETGYMHNRVRMVVASFLVKHLLQPWQE
GYAWFEHTLVDFNAANNAMGWQWVSGTGIDSAPYFRIFNPSLQGEKFDADGAYIKKWVPE
LALLPAKYIHAPQTAPTAILEQAGITLGDTYPLPIVDHKTARARALERYNAIKKA
NT seq
1428 nt
NT seq
+upstream
nt +downstream
nt
atgaataaaaaaataattgtactatttcgtaatgatttacgactagatgatcaccccgcg
ctctggcatgcagctaaatcaggggtcattttaccggtttatattcataatgagcaattt
tcaatgtgcaataccgctcaaagtttttggacgtactattcacttcagaatctacaagcg
acacttgatgactataacacgcaactgattttacgaaagggtgaagtcatttcagaagta
ctacagttagctgtagatactgaagcggacgctgtgtattttaacgagcgttttcttcca
actgaacgaaatgaagatgagcagctaaccaatatattacaggctaataatattgaagta
aaagcattctatggtgattcattattcaacttatcgaacattcaaaatcaacaaaacaag
ccttatgccatttttacatcattttataagcgttgtttgcaggaacccgtgcgtaaaccg
cttggtcaacctactaatattagagcttttccaacgaaggtatcatctctagccttagag
caattgcaattactgcatggtaattggtatcacaagtttcaccattattggaaccctggg
atagatggggcaatggagcagtgggaacttttcgtagaacaaggtttatttggctaccaa
gataagcgagattaccctgccaaagaaaccatttctaaaatgtcgccatttcttgcagtg
ggtaacattagcattcgcttgctttgggcaacatgccaagagctaatagatgatgaggac
aacgcaatatttagtcagcagatagaaagctttttaagacaacttatatggcgagagttt
tcgatttatcaactattgaactatcctacattttctaccgattcattacgcagtaatttt
caacattttgagtgggagcctcattccattcgtcttgaagcatggaaaactggacaaacg
gggtatcctcttgttgatgcagggatgcgtgagctttgggaaaccggctatatgcataac
cgtgtaagaatggttgttgcatcttttctagtgaaacacttattacaaccttggcaagaa
ggttatgcatggtttgagcatacgcttgtcgactttaatgcagcaaataatgctatgggt
tggcaatgggtaagcggtacgggtatagactctgctccttattttcgtatcttcaaccct
tcgttacaaggagagaaatttgatgcagatggtgcttatataaaaaaatgggtgcctgaa
ttagcacttctccctgcaaagtatatacacgcgccacaaacagcaccaacggccatcttg
gaacaagccggaatcacattaggtgatacctatccattgccaatcgtagatcataaaaca
gcaagagcccgtgcattagaacgatacaacgctataaaaaaagcttag
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