Lysinibacillus varians: T479_23255
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Entry
T479_23255 CDS
T03062
Name
(GenBank) LysR family transcriptional regulator
KO
K21900
LysR family transcriptional regulator, transcriptional activator of the cysJI operon
Organism
lgy
Lysinibacillus varians
Brite
KEGG Orthology (KO) [BR:
lgy00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lgy03000
]
T479_23255
Transcription factors [BR:
lgy03000
]
Prokaryotic type
Helix-turn-helix
LysR family
T479_23255
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LysR_substrate
HTH_1
PBP_like_2
Motif
Other DBs
NCBI-ProteinID:
AHN23804
LinkDB
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Position
complement(4570244..4571164)
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AA seq
306 aa
AA seq
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MIGKLDLYRVFSVVAKNSSFSRAAKDLFMTQPAVSQAMMQLERELGTRLFNRTPKGVTLT
TEGKLLFEYTNSALGLLDAGEEKLLEFKNLTTGQLKIGVGDTISRFFLMPYLESFHTMYP
NIKLQMLNGTTSEICNFIKSGEADVGLCNFPIEDVSLQLTACTEVQDIFVCGEKYKTLKS
KSLSFADLLKFPLIFLEKKSNSRNYVETYLMSKGIQIAPEFELGSHDLVLEFARSNLGIA
CVTKEFSKDYLQRGLLYELPLVESIPNRSIGMCYLKSVPLSRAATKFIEIIERKQARKQI
NPRTLK
NT seq
921 nt
NT seq
+upstream
nt +downstream
nt
atgatagggaaattagatttatatcgtgtttttagtgtcgttgcaaaaaatagtagcttt
tctagggcggctaaagatttatttatgacacaacccgccgttagccaagccatgatgcag
ctcgaaagggagctaggcactagactcttcaaccgaacaccaaagggcgtcacattaacg
acagaaggaaagttgctatttgaatatactaactcggcattaggtcttttagatgcaggg
gaagaaaagctgctagaatttaaaaatttaacgacaggccaattgaaaataggggtagga
gatacaatttcccgcttctttttaatgccatatcttgagtcatttcatacgatgtatcca
aatataaaattgcaaatgttaaatggcactacttcggaaatatgtaactttataaaatcg
ggtgaggctgatgtcgggctttgcaatttcccgatagaagatgtcagtttacaattaacc
gcgtgcacggaagttcaagatattttcgtctgtggagagaaatataaaacgctcaagtca
aagagcttaagttttgcggatttattaaagttcccccttatttttcttgagaagaaatcg
aactcgagaaactatgttgaaacttatttaatgtcaaaaggtatacaaattgcaccggag
tttgagctcggttcacatgatttagtgcttgaattcgcacgtagtaatttaggaatcgcg
tgtgtaacaaaggaattttcaaaggattatttacagcgagggctactttatgaattgcca
cttgtagaaagcattccaaatcgtagtattgggatgtgttatttaaaaagtgttccattg
tcccgtgctgctacaaaatttatcgagattattgaacgtaaacaagctcggaagcagata
aacccccgaactttaaaataa
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