Listeria grayi: NCTC10812_00409
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Entry
NCTC10812_00409 CDS
T06340
Symbol
phrB
Name
(GenBank) Deoxyribodipyrimidine photo-lyase
KO
K01669
deoxyribodipyrimidine photo-lyase [EC:
4.1.99.3
]
Organism
lgz
Listeria grayi
Brite
KEGG Orthology (KO) [BR:
lgz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgz03400
]
NCTC10812_00409 (phrB)
Enzymes [BR:
lgz01000
]
4. Lyases
4.1 Carbon-carbon lyases
4.1.99 Other carbon-carbon lyases
4.1.99.3 deoxyribodipyrimidine photo-lyase
NCTC10812_00409 (phrB)
DNA repair and recombination proteins [BR:
lgz03400
]
Eukaryotic type
SSBR (single strand breaks repair)
Direct repair
NCTC10812_00409 (phrB)
Prokaryotic type
NCTC10812_00409 (phrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
FAD_binding_7
DNA_photolyase
Motif
Other DBs
NCBI-ProteinID:
VEI31400
LinkDB
All DBs
Position
1:415418..416791
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AA seq
457 aa
AA seq
DB search
MQLGVLLNRVFRTKHNPLFSYVEQNRSKIDACYFIIPLEDLKGASERKKAFYFGTVNQFL
TELAKYEIRPFLVTYEKLSEFCQKQKIDTILMAGDIMSYHQEEYDIRHQREKLTAAGLKI
KTIRVQHYFHPRATFKNGDEPYKVFTPFYKANRPHVTIQKPAAYSLKQLSEIAVTGTGHL
DHSYPDDGLSEEQAAANWQTFLKESIEAYETNREVLAEIKTSWLSVYLAYGLIDIQQIFN
QLLDQREANEKNYEAFIRELLFREFYYVLMVTYPEMATQSFKPNYRQIEWSLNKANFERW
KKGETGYPIVDAAMQELNQTGYMHNRMRMVVSQFLTKDLFIDWRWGEDYFRSQLIDYDNA
SNVNGWQWSASTGTDAVPYFRMFNPIRQSERFDQDGAYIKQYLPIFKAVPAAYLHDTEKN
KAKLATECDIELGKTYPAPIVDHKQSRQAVMEKLGRR
NT seq
1374 nt
NT seq
+upstream
nt +downstream
nt
atgcagcttggtgtacttttaaaccgcgtcttccgaacgaagcataatccattattttcc
tatgtggaacaaaaccgttctaagatcgatgcgtgttattttattattccgctggaagat
cttaaaggggcaagtgaacgaaaaaaagctttttactttggaacagtcaaccagttccta
acagaactggcaaaatatgagatccggccattcttagtgacgtatgaaaaattatccgaa
ttctgtcagaagcagaaaatcgatacgatcctaatggcaggggatattatgagttatcat
caagaagaatatgatattcggcatcagcgtgagaagttaacagccgctggtttgaaaata
aaaacgattcgtgtccagcattatttccacccgcgggcaacttttaaaaacggcgacgag
ccctataaagtattcacgcctttttataaagcaaatcggccacatgtgacgatccaaaaa
cctgctgcctattctctaaaacagttaagtgagatagcggtcactggaacgggccatctt
gatcacagctatccagatgacgggttatctgaggagcaggcagcggcaaattggcagaca
tttttgaaagaatcgatcgaagcgtatgagaccaatcgggaagttctggcagagatcaaa
accagttggcttagtgtatatctggcttatggcttgatcgacatccagcagattttcaat
cagttgctcgatcagcgggaagcgaatgaaaaaaactacgaagcttttattcgggaactg
ctgtttcgagagttttactatgtcctgatggtcacttatccggagatggccacgcagtct
tttaaaccgaattaccgtcaaatcgaatggtctttgaataaagcgaactttgaacgttgg
aaaaagggagaaactggttatccgatcgtggatgctgccatgcaggaattaaatcaaacc
ggctatatgcacaatcgcatgcgcatggtcgtttcccagtttttgacaaaagatctcttt
atcgactggcgttggggagaagattactttcgcagtcagctgatcgactatgataatgcc
tccaacgtcaacggctggcagtggtctgcttcaactggaaccgatgctgttccttacttc
cgcatgttcaatccgatccggcaaagtgaacgatttgatcaggatggtgcctatatcaaa
cagtatctgccgatttttaaagccgttcccgctgcatatctacatgacactgaaaagaac
aaagccaaattggctactgaatgtgatatcgaactcggaaaaacgtatcccgctccaatc
gtcgatcataaacagagccgccaagccgtaatggaaaaactcggccgccgctga
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