KEGG   Listeria grayi: NCTC10812_01340
Entry
NCTC10812_01340   CDS       T06340                                 
Symbol
rny
Name
(GenBank) Ribonuclease Y
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
lgz  Listeria grayi
Pathway
lgz03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:lgz00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    NCTC10812_01340 (rny)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lgz03019]
    NCTC10812_01340 (rny)
Messenger RNA biogenesis [BR:lgz03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     NCTC10812_01340 (rny)
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KhpA-B_KH KH_2 DUF4407 FUT8_N_cat
Other DBs
NCBI-ProteinID: VEI33978
LinkDB
Position
1:1339952..1341520
AA seq 522 aa
MTNLIIFTSISGLLFLIVGLVVGYVFFKSSTEKKLAAARGTAELIVEDAKKEAETAKKEA
LLEAKEENHKLRTEIENELRGRRTELQKSENRLLQREENLDRKDTSLSKREAALERKEES
ISKRQQHIEEEESKLAEMVRQEQVELERISALSKEEAKGIILNQVEEELSHDTAIMVRES
EARAKEDADKKAKNILSLAIQRCAADFVAENTVSVVTLPNDEMKGRIIGREGRNIRTLET
LTGIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQDGRIHPARIEEMVDKARKEVDEH
IREIGEQATFDIGIHSIHPDLIKILGRLRYRTSYGQNVLNHSLEVARLAGIMAGELGEDV
TLAKRAGLLHDIGKAIDHEIEGSHVEIGVELATKYKENEVVVNSIASHHGDTDPTSIIAV
IVAAADALSAARPGARSETLENYIRRLEKLEEISESYDGVEKSYAIQAGREVRIMVEPDT
IDDLASYRLARDIRKRIEDELDYPGHIKVTVIRETRAVEYAK
NT seq 1569 nt   +upstreamnt  +downstreamnt
atgacgaatctaattattttcaccagcatctccggtttgcttttcttaatcgtcggtctc
gttgttggttatgtattctttaagtctagtacagagaaaaaattagcagctgccagagga
actgctgaattgatagtagaagatgcgaaaaaagaagcagaaactgcgaaaaaagaggcg
ttgcttgaagctaaagaagaaaaccataagttacgtactgaaatcgaaaatgaacttcgt
gggcgaagaacagagttacaaaaatcagaaaatcgcttattgcaaagggaggaaaacctc
gaccgtaaagatacttctctaagtaagcgagaagctgcacttgagagaaaagaggagagt
atcagtaaacgacaacaacatattgaagaggaagaaagcaaacttgctgagatggttcga
caagaacaggtggaattagaacgcatttctgcgcttagcaaagaagaagcgaaagggatc
atcctgaaccaggtagaggaagaacttagccacgatacagcaattatggtgagagaatca
gaggcgagagcaaaagaggatgcggataagaaagcgaaaaacattctatccttagccatc
caacgttgtgcagccgattttgttgctgaaaacactgtatccgttgttacccttccaaat
gacgaaatgaaaggccgcatcatcggtcgtgaaggacgaaatatccgtacactggaaaca
ttgactggtattgatcttatcattgatgatacgccggaagctgttatattatctggcttt
gatccgattcgtcgtgagattgctcgaatcgcacttgaaaaacttgtccaagacggacgt
atccatcctgcacgtatcgaagaaatggtcgataaagcgcgcaaagaagtggatgaacac
attcgtgaaatcggagaacaagcgacatttgacatcggaatccattcgattcatcccgat
cttattaagatccttggtcgtttgcgttaccgtacaagttatggtcaaaacgtcttgaat
cattcgctggaagtagcgagactggctggcatcatggctggtgagctaggcgaagatgtg
acacttgccaaacgtgctggtttgcttcatgatattgggaaagcaattgaccatgaaatt
gaaggaagccatgtcgaaatcggcgttgagcttgctacgaagtacaaggaaaatgaagta
gtcgtgaatagtatcgcttcccatcacggggataccgatccaacttcgattattgctgtc
attgttgctgccgcagatgcactttctgcagcgcgtccgggtgcaagaagcgaaacgttg
gaaaactacatccgtcgtcttgagaaactggaagaaatttccgaatcttatgatggtgta
gaaaaatcttacgcgatccaagctggccgtgaagttcgtatcatggtggaaccagacacg
atcgatgatttagcttcttaccgtttagcacgcgatatccgcaaacggattgaagatgaa
ctcgattaccctggtcatatcaaagtaacggtcattcgtgaaacaagagcagtagaatat
gccaaataa

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