Listeria grayi: NCTC10812_01563
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Entry
NCTC10812_01563 CDS
T06340
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lgz
Listeria grayi
Pathway
lgz03030
DNA replication
lgz03430
Mismatch repair
lgz03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lgz00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
NCTC10812_01563 (dnaE)
03430 Mismatch repair
NCTC10812_01563 (dnaE)
03440 Homologous recombination
NCTC10812_01563 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lgz03032
]
NCTC10812_01563 (dnaE)
03400 DNA repair and recombination proteins [BR:
lgz03400
]
NCTC10812_01563 (dnaE)
Enzymes [BR:
lgz01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
NCTC10812_01563 (dnaE)
DNA replication proteins [BR:
lgz03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
NCTC10812_01563 (dnaE)
DNA repair and recombination proteins [BR:
lgz03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
NCTC10812_01563 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
tRNA_anti-codon
tRNA_anti_2
HROB
POT1
OCD_Mu_crystall
Motif
Other DBs
NCBI-ProteinID:
VEI34422
LinkDB
All DBs
Position
1:complement(1565544..1568876)
Genome browser
AA seq
1110 aa
AA seq
DB search
MGFVHLQVKSAFDLLSSTASLDALIAKAKACGFDSLAITDKNALYGAVNFYEKCQAAQIK
PIIGMTVSVYGYIDTTRSYELLLLAETTAGYQNLLKIASAIQTQDEKVLPLNWLKAYGKG
LIAISPGATGEIEHLLMDSSPESAAEVVAYWQSIFSQNSFFLSIQAENPRLKEAVQNFSS
TQGIDVVLTKDVQYLEAGDVRAQEVLMAIRDNRTVDYEKLPLAGPNFLASADEMAASLTT
DFEQQAYEQTAKIAARCQVEIPMGLQLLPRFPLRSGSNASAELEKLALAGLQERNVARDK
RYLDRLRYELDVITKMGFQDYFLIVWDVMRFAREVGILTGPGRGSAAGSLVSYALRITDV
DPIAYRLLFERFLNPERVTMPDIDLDFPDNRRDEVIRYVVDKYGADHVAQIGTFGTLAAK
AAIRDTARTFGLNAVLLSEWSKMIPSQLGITLKAAREQNPRLNSHIHSSHVNEMIWEIAE
KLEGLPRHISTHAAGIVINDEPLVTYTPVQSGSGDARLTQYAMGELERIGLLKMDFLGLR
NLSLLDRILKIVNYNRTKPLTLADIPLEDKATLNLFQKGDTTGVFQFESSGIRRVLRKLK
PTSFEDIVAVDALYRPGPMEQIDTFIARKHGEEMIVYPHEDLKQILDVTYGVIVYQEQII
QVANRMAGFSLGEADILRRAVSKKKREVLDGFRKQFVSGANANGYAETTANEVYDLIVRF
ANYGFNRSHAAAYSKIAFQLAYLKAHYPAAFMSSLLSSVFGNDEKIAQYVTEAKNYGIEM
LAPSVNKSGYYFQVEQENKIRYSLRIIRKVPNKFILELLNVRKQGGPFADFFDFCERMPN
NMLTHQVLEALIYAGAFDEFGKDRAVLMASIEAGLQYTDLFGESEAGMNLFATEDSFLKS
MKPKYREADPMPMDTKLDKEKEFTGQYVSAHPVTSYQQVAQTLAVTELADVTNGNSYAIA
VYVHQIKTVRTKKGSQMCFLTISDASKEFRAVVFPEVYAKAQAIIQKGAILLLKVKVEDR
NGEMQAVVNSIQDMKTLEPAKRLFLKIATAEELNMVKKILLQNAGDHAVIVYHAGEKQTL
QLQNKFSVNGSENLLHQLKQTLGTENVVWK
NT seq
3333 nt
NT seq
+upstream
nt +downstream
nt
atgggatttgtacatctccaagtaaaaagtgcatttgatctgctttccagcacagcctcg
cttgacgcactcattgcgaaggcaaaagcgtgtggattcgattctctagcgatcacagat
aaaaatgccttatatggggcagtgaatttttatgaaaaatgtcaggctgctcaaattaaa
ccgattatcggaatgaccgtttccgtttatggctatatcgatacgacacgttcttatgag
ttgcttttactagctgaaactactgcgggctatcagaacctgcttaaaatagcgagtgcc
attcaaactcaagatgaaaaagtcctcccactcaattggctgaaagcttatggaaaagga
ttgattgcgatttctcctggagcgacaggtgaaatagagcatctgttaatggatagttct
cctgagagtgctgctgaagtagtagcatactggcagtcgatcttttcacagaattctttt
ttcttatcgatccaagcggagaatccgcgcttgaaagaagctgttcagaatttcagtagc
acgcaaggaatcgatgttgtccttactaaagatgtccaatatctggaagcaggagacgtt
cgtgcgcaggaagtgttgatggcgatccgtgataatcgaactgttgattacgaaaaattg
ccgcttgccggaccgaatttccttgcttctgctgatgaaatggcagcaagcttgactact
gactttgagcaacaagcttatgaacaaacggcgaagatcgcagcaagatgtcaagttgaa
atcccaatggggctgcagctgctaccgcgtttcccgctgaggtcaggcagcaatgccagt
gcggaattagaaaagttggcgctggcaggattgcaagaaagaaatgttgcaagagacaaa
cggtatttagaccggttgcgttacgagctggatgttattacgaaaatgggatttcaagac
tattttctgatcgtttgggacgtcatgcgtttcgccagagaagtagggatcctcaccgga
ccagggcgtggttctgccgcaggatcactggtttcttatgctcttcggatcacggatgtg
gatccgatcgcttatcgtctgctgtttgaacgtttcttaaacccggagcgtgtaacgatg
ccggatatcgatctggatttcccagataatcgccgcgatgaagtcattcgctatgtcgtc
gataaatacggcgcagatcatgttgctcagatcggaacgttcgggacattagctgcaaaa
gcggcgatccgcgacacggcaagaacgtttggattgaatgcagtgctactttccgaatgg
tcgaaaatgatccctagtcaacttgggataacattaaaagcagcgcgtgaacagaatccg
cggttaaacagtcatatccattcttcccatgtcaatgagatgatctgggagatcgcagag
aaattggagggactgccgcgccatatctccacacatgctgccggaatcgttatcaacgat
gaaccgcttgttacctatacacccgttcagtcgggaagtggagatgcacgtttgacgcaa
tatgcgatgggcgagctagaacgtatcggtcttttgaaaatggactttttaggactgcgg
aatctcagcttgttggatcggatcttgaaaatcgtcaattataatcgtacgaagccgctc
acgctagcggatattccactggaggacaaggcgacgctgaatctttttcaaaaaggagac
acaaccggagtctttcaattcgagtcaagtgggattcggcgtgtccttcgcaaactgaag
ccgacttcttttgaagatatcgttgcggtcgatgccctgtatcgtcccggtccaatggaa
cagatcgatactttcattgcccgcaagcatggggaagaaatgatcgtttatccgcatgag
gatctgaagcagatcttagatgtcacgtatggtgttatcgtttaccaagaacaaatcatt
caagtggcgaaccggatggctggtttctcgctaggagaggcagatatccttcgccgtgca
gtgagcaagaaaaagcgggaagttttagacggctttcgcaaacaatttgtctccggcgca
aatgcaaatggttatgcggagacgacggccaatgaagtgtatgatctgatcgttcgtttt
gccaattacggcttcaaccgcagtcatgctgctgcgtattccaagatcgctttccaacta
gcttatttaaaagcgcattatccagcagcttttatgtcctctctattgagttctgtattt
gggaacgatgagaaaatcgcccagtacgtaacggaagcgaaaaactatggaatcgagatg
cttgcgccaagcgtcaataaaagtggctattatttccaagtagaacaggagaacaagatc
cgctatagcttgcgtatcattcgaaaagtgccaaataaatttattttagagctcttgaat
gtcagaaaacaagggggcccgtttgctgatttcttcgatttctgtgagcgtatgccaaat
aatatgctgacccaccaagttttagaagcgctgatctatgcaggagcatttgacgaattc
ggtaaagatagagcggtccttatggcttctattgaggcaggactccaatatacagatctt
ttcggtgaatcggaagcaggaatgaatctctttgctacagaagattctttcttaaagtcg
atgaagccgaaatatcgggaagcggatccgatgccgatggatacaaaactagataaagaa
aaagaatttaccggtcaatacgtttccgcacatcctgttacttcctatcaacaagtagcg
cagacacttgcggttacagaacttgctgatgtgacgaatggaaattcttacgccattgca
gtgtatgtacatcaaatcaagacggttcgcacgaaaaaagggtcgcagatgtgcttttta
accatcagtgatgcctccaaggaatttcgggctgtggtttttccagaagtatatgcaaag
gcgcaagcaatcatccaaaaaggtgcgatcttgctgctgaaagtaaaagtagaggatcgt
aacggggagatgcaagctgttgtgaacagtatccaagatatgaaaacactcgagcctgcc
aaacggcttttcttgaaaatcgccacagctgaagaactgaatatggtcaaaaagatctta
ctccaaaatgccggtgaccatgccgttatcgtttatcatgccggggaaaagcagacgcta
caactgcaaaataaattctccgtaaacggctcggaaaacttgctgcaccaattaaaacag
acgttaggcaccgaaaatgtcgtttggaaataa
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