Listeria grayi: NCTC10812_02239
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Entry
NCTC10812_02239 CDS
T06340
Symbol
addA
Name
(GenBank) ATP-dependent helicase/nuclease subunit A
KO
K16898
ATP-dependent helicase/nuclease subunit A [EC:
5.6.2.4
3.1.-.-]
Organism
lgz
Listeria grayi
Brite
KEGG Orthology (KO) [BR:
lgz00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lgz03400
]
NCTC10812_02239 (addA)
Enzymes [BR:
lgz01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC10812_02239 (addA)
DNA repair and recombination proteins [BR:
lgz03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
AddAB pathway proteins
NCTC10812_02239 (addA)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
PDDEXK_1
UvrD_C_2
DEAD
AAA_12
ResIII
NPHP3_N
AAA_16
AAA_30
Motif
Other DBs
NCBI-ProteinID:
VEI35826
LinkDB
All DBs
Position
1:complement(2207381..2211103)
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AA seq
1240 aa
AA seq
DB search
MAFSIPEKPESATWTDDQWKAIHASGQNILVAAAAGSGKTAVLVSRIIEKLKDETAGLQV
DELLVVTFTNASAAEMKQRVEAALEKALQEDPDSRHLKKQIALLNYASISTLHSFCLDVI
RKFYYVADIDPNFRLIEPLESGMIQDEVMEALLERHYGNEENERFFHLVDSFTNDRSDDV
LLDILTRLYDFSRANPDPVAWLRQIASYYDTTELAAVSELPFYRYIEADIRIHLEQALEE
LRTALKFAEEPGGPDVYLPLIENEKLQLEQLLDDYPLDWEAKKEAISSVKFGRLPTIKNK
ENYDESLIEQTKQARDGAKKQLKAITEEWFQRDAGNYLADLAKMKPDIELLTELVEEFAA
DFLAEKQRRGVLDFNDLEHLALAILSEKTEATSYEPSEIALEYRHKFKEVLIDEYQDTNM
VQETILSLLTTPSEAAGNLFMVGDVKQSIYRFRLAEPTLFLDKYKRYRVDGENTGIRIDL
SKNFRSRQNVLTTTNFIFKQLMDTQIAEIDYDEAAELVLGAAFPETEERYQPEVALVDMK
QEERESEETDSPQELQKNQAEAMLIARKIKKMITEKFQIYDKKMQQYRPIQYRDIVLLSR
AMTSATDIEEAMKAHDIPFYANSNTGYFEATEIRIMLAVLKVIDNPYQDIPLAAVLRSPI
LGVSEEILGQIRAAKPKGYFYDALLLYQQTTISPEADRIDRFLKQLELWRDLANRESLPK
LIAQIYEETHYYDFVGGLPGGKQRQANLRALYDRSSQYEKTAYRGLFRFIRFIERMRVRG
DDMGTAKTLGEKEDVVRMMTIHASKGLEFPVVILAGTSRRFNMRDIYSKYLLDKEFGFSA
RYNDVDKRIVYPTIMQQAIKQKKYRETIAEEMRVLYVALTRAEQKLIITGTVADWEKTKT
KWATQSSHTGWILPAGVRLQGKTYLEWIGSAFARHPEFAKLLDAGQVAALPIDMPIGLEI
VASEQLTNPAEAKTSKPVYLDNIQAGKTVPIESPEKESINSYLEFIYPNQVETQIRAKQS
VTEIKRQFSVQDSWSDTKIVEGIQKVSLDRPKFLQRKGLSATEKGTAMHTVMQSLPLSHE
PDDKELTDFLEELVAKEILSPEQKESITYSEIQAFFRTKLGRLINENLQQVEREIPFSYH
LPASVIYPEAETEERVLIQGVIDCMLEEADGVTLIDYKTDRIGSHFPNGWLEAEPVLKKR
YEVQMHLYQKAVEAITKKPVKHIYLYFFDGAHVCQLETEE
NT seq
3723 nt
NT seq
+upstream
nt +downstream
nt
atggctttttctatcccggaaaaaccagaaagtgccacatggacagatgaccagtggaaa
gcgatccatgcaagcggtcagaatatcctcgttgcagcagcagcaggatccggaaaaacc
gccgtgcttgtctcgcggatcattgagaaattaaaagatgaaacagcgggactccaagtg
gatgaactgctagtcgtgacatttaccaacgcgtctgctgccgaaatgaagcagcgtgtc
gaagccgccttagaaaaagcattgcaggaagatccggattccagacatttgaaaaaacaa
atcgccttgctgaattatgcctcgatctccacattgcattccttctgcttggatgtgatc
agaaaattttattatgtcgcggatatcgatccgaatttccgtttgatcgagccacttgag
agtggcatgatccaagatgaagtcatggaagcacttcttgagagacattatggcaatgaa
gaaaatgaacgctttttccatctagtggacagctttaccaatgaccgttccgatgatgtg
cttttagatatcttaactcgcctatatgatttctcacgggcaaacccagatccggtggca
tggctgcggcagatcgccagctattatgatacaacggagcttgcagctgtaagtgagctt
ccgttctatcgttatatcgaagcagatattcggatccatttggagcaagcactggaagag
ctgcgaaccgcgttgaaatttgccgaagaaccgggcggacctgatgtatatcttccattg
atagaaaatgaaaaactgcagttagagcagcttttagatgattatccacttgattgggag
gcaaaaaaagaagcgatatccagcgtgaaattcggaagattgccgacaatcaaaaataaa
gaaaattacgatgaatcgcttattgagcaaacaaaacaggcgagagacggagccaaaaag
caacttaaagcgattaccgaggagtggttccaacgcgatgcgggtaattatctggcggac
ttggcaaaaatgaaaccagatatcgagttgttaacggaactcgtagaagaattcgcagca
gattttttagcagaaaaacaacgccgtggcgttttggactttaatgatctggagcatttg
gcattagcgattttaagcgagaagacggaagcaacaagctatgagccatccgaaatcgct
ttagagtatcgtcataaatttaaagaggtactgatcgatgaataccaagatacaaatatg
gtccaggaaacgatcctgagcttattaacgacaccttcagaagcagcgggaaatctgttt
atggtcggcgatgtgaaacaatcgatctatcgtttccgtttagcagaaccaacgttgttt
ttggataagtataagcgttatcgtgttgatggtgagaatacaggaatccgcatcgattta
tcgaaaaatttccgaagtcgccaaaatgtactgacaaccactaattttattttcaagcag
ttgatggatacccaaatagcagaaatcgactatgatgaagcggctgaattggttttgggt
gctgcttttcccgaaacggaggagcggtatcagccggaagtcgcattagtagatatgaag
caggaagaaagagaatctgaagagactgactctccgcaagaattgcagaaaaatcaggcg
gaagcaatgctgatcgcccgaaaaataaagaaaatgatcacagaaaaattccagatctat
gataaaaaaatgcagcaataccgtccgatccaatatcgggacatcgtcttgctttcgcgg
gcgatgacgagcgccacggatatcgaagaggcgatgaaagcacatgacataccattttat
gccaacagcaacaccggctattttgaagcgacagagattcggataatgcttgctgtgctg
aaagtcatcgacaatccttatcaagatattccattagctgctgtccttcgttcgccgata
ttaggtgtttccgaagagatcctcggtcagatccgtgctgcaaagccaaaaggttatttt
tatgatgcgctcttgctttaccaacaaacgacgatctccccggaagcagaccgcatcgac
cgctttttgaaacaattagaattatggcgtgatctcgccaatcgggaaagtctaccgaaa
ctgatcgcgcagatctatgaagaaacgcattattatgatttcgtaggtggcctccccggc
gggaaacagcggcaggcgaacttgcgtgctctgtatgaccgcagcagccaatatgaaaaa
acagcttatcgcggtttattccgcttcatccgcttcatcgaacggatgcgcgtgcgtggc
gatgacatgggaacggcaaaaacgcttggcgagaaagaagatgtcgtacggatgatgacg
atccatgcaagtaaaggattggaatttccggtcgttattcttgcgggaacaagccgccgt
ttcaacatgcgagatatctatagcaaatacttgctggataaagagttcggtttttctgca
cgctataacgatgtcgataagagaatcgtttacccgacaatcatgcagcaagcgatcaag
caaaaaaaatatcgggaaacgatcgcagaagaaatgcgtgtactctacgttgctttgact
agagccgaacaaaaactgatcatcactggaacagttgctgattgggaaaaaacaaaaact
aagtgggctactcaatcaagtcatactggctggatattgccggccggagttcgtctgcaa
ggaaagacctatttagaatggatcggcagtgcttttgcccgccatccggaatttgcaaaa
ttattggatgccggccaagtagcggccttgccgatcgatatgccaataggattagaaata
gtggcgagcgaacagctaacaaatcctgcagaggctaaaacgagcaaaccagtctattta
gataatatccaagcagggaaaaccgtgccaatcgaaagtccggaaaaagaaagcatcaac
agttatctagagtttatttatcccaaccaagtcgaaacacaaatccgtgccaaacaatct
gttacggaaataaaacgccaattttctgtgcaagacagttggagcgataccaaaatcgta
gaaggcattcaaaaagtatcattggatcggcctaaatttcttcaacgtaaaggactttcc
gcgacagaaaaaggtactgcgatgcacacggttatgcagtcactgccgctctcccatgag
ccggatgataaggaattgacggatttcctagaagagttagtagcaaaagagatcttgtcg
ccagagcagaaagaaagcatcacctactctgagatccaagcctttttccgaacaaaacta
ggccgtctgataaacgaaaacctgcaacaggtagaacgagagattccgttcagttatcat
ttgccagcaagcgtgatttatccggaagcagaaactgaagaacgcgtcttgatccagggt
gtgatcgattgtatgcttgaagaagcagatggtgtgacactgatcgattacaaaacagat
cgaatcggcagccactttccgaatggctggttggaagccgaacctgtacttaaaaagcgc
tatgaagtacagatgcacttatatcaaaaagcggtcgaggcaatcacgaaaaaaccagtc
aagcatatttatttatacttttttgacggtgctcatgtgtgtcaattggaaacggaggaa
tga
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