Legionella hackeliae: LHA_0728
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Entry
LHA_0728 CDS
T03809
Name
(GenBank) Ribonuclease E
KO
K08300
ribonuclease E [EC:
3.1.26.12
]
Organism
lha
Legionella hackeliae
Pathway
lha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHA_0728
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lha03019
]
LHA_0728
03009 Ribosome biogenesis [BR:
lha03009
]
LHA_0728
Enzymes [BR:
lha01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.26 Endoribonucleases producing 5'-phosphomonoesters
3.1.26.12 ribonuclease E
LHA_0728
Messenger RNA biogenesis [BR:
lha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Ribonucreases
LHA_0728
Ribosome biogenesis [BR:
lha03009
]
Prokaryotic type
rRNA processing factors
LHA_0728
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNase_E_G
RNase_E_G_Thio
S1
DUF4901
DUF2076
DnaJ_CXXCXGXG
Motif
Other DBs
NCBI-ProteinID:
CEK09815
UniProt:
A0A0A8ULR1
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All DBs
Position
I:complement(734594..736519)
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AA seq
641 aa
AA seq
DB search
MEKMLINATQAEEVRVALVKANHLYDLDIECPSEVKKKGNIYKAVVTRREPSLDAVFVEY
GAKRQGFLPLKEIAPEYLSKHPDEFGDEKPPITSLLREGQELLIQVDKEERGNKGAALTT
YITLAGCYLVLMPNNPNSGGISRRIEGDDRDELKETLNALELPDEMGLIIRTAGVGKSQD
ELQADLDMLCNQWQAIKQAYNTQLAPCLIHQEGDVIIRSIRDNLRKSIGEIIIDDQISYV
KAKQYIEQVKPDFLPNLKLYNSTVPLFNFYQIESQIEMAYQREVPLPSGGALVIDRTEAL
VSIDINSAKATSGSDIETTALNTNLEAADEIARQLRLRDLGGLVVIDFIDMSSSKNQRDV
ENRLKEALKADRARIQVGRISRFGLLEMSRQRLRLSLGENAQEVCPRCEGRGTVRNIQSH
GLSIIRLIEEEALKEKTAEIQVQLPPEMATFIMNEKREFILNIEKRHAVQVLIIANPYLQ
PPHYEITRLKEDNVGKTKKPSYTLIHQPELALTRADETTKLDEPAVKAFSLQTPAKIPHS
GFIKRLWNSLFGAGETTTVTTRQEKTTRSSHPPKQSHPDRRQQGQGNRRRRPSGNQMRNT
NNPQRKKGQGGSSHQSSGRVVQIKPDQAKKKAPVSKDSHEH
NT seq
1926 nt
NT seq
+upstream
nt +downstream
nt
atggaaaaaatgttaataaatgcaacgcaagccgaagaggtacgagttgcactggtcaaa
gccaaccatctgtatgatttggacatagagtgtccatctgaagttaagaaaaaaggaaac
atctacaaagcggtcgttacacgacgcgaaccaagcctggatgctgtatttgtggaatat
ggcgccaaacgtcagggttttcttcctctgaaggaaatagcgcctgaatatttaagcaaa
catcctgatgagtttggtgatgaaaagcctccaattacgtctcttcttcgcgaaggccaa
gagctactaattcaggttgataaggaagagcgtggcaacaaaggggctgctctaacaacc
tatattactttagcgggatgctatttagtacttatgcctaacaatcctaattcgggcggc
atttcacgtcgtatagaaggcgatgaccgtgatgaattaaaagaaacattgaatgcttta
gaactgcctgatgagatgggtttgattatccgcacagccggtgtaggcaagagtcaggat
gagcttcaggctgaccttgatatgttatgcaatcaatggcaagccatcaaacaagcgtat
aatactcagcttgcgccatgcctcattcatcaagaaggtgatgtgatcattcgctctata
cgtgataatttacgtaaatcgattggcgaaattattatcgatgatcaaatttcttacgta
aaagccaagcaatacattgaacaagttaagcctgactttttaccgaatctgaagctatat
aacagcaccgtacctttatttaacttctaccaaattgaaagccagatagagatggcttat
cagcgagaagttcctctaccttctggtggcgcccttgttatcgatcgtaccgaagcgtta
gtgtctatcgacattaactcagccaaggctaccagtggttctgatattgaaacaactgcc
ttgaataccaatcttgaggccgctgatgaaattgcccgccaacttcgcttacgcgatttg
ggtggtttggttgttatcgattttatcgatatgagttcaagcaaaaatcaaagagatgtt
gaaaatcgtctcaaagaggcattaaaagctgatagagctcgtattcaggttggtcgtatc
tctcgctttggcttacttgaaatgtctcgccagcgcttacggctctccttaggagagaat
gctcaggaagtatgcccacgctgcgaaggaagaggcacggtaagaaatattcaatctcat
ggattgtccatcataagactcattgaggaagaagcacttaaggaaaagaccgctgaaatt
caggttcaattaccacctgaaatggctacttttatcatgaatgaaaagcgtgaattcatc
ttaaacattgaaaaacgtcatgcggttcaggtattgattattgctaacccttatttacaa
cctccacattatgaaataactcgtttaaaagaagataatgtgggaaaaactaaaaaacca
agttatacattaattcatcagcctgaacttgcccttactcgtgctgatgaaaccactaag
cttgatgagccagcagtaaaagcgttttcactacaaacgccagcgaaaataccgcatagc
ggattcattaagcgcttatggaatagtttatttggtgctggtgaaacaactactgttaca
actcgtcaggaaaaaacgacacgaagctctcatccaccgaagcaatctcatcctgatcgt
cgccaacagggccaaggcaatcgacgccgacgtcctagtggcaatcaaatgcgtaatacg
aataatccacaacgcaaaaaaggacagggtggtagtagccaccagtctagtggacgagtc
gtacaaatcaaaccggatcaggcaaaaaaaaaagcgccagttagcaaagactcccacgag
cattga
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