Legionella hackeliae: LHA_1272
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Entry
LHA_1272 CDS
T03809
Symbol
dnaE
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lha
Legionella hackeliae
Pathway
lha03030
DNA replication
lha03430
Mismatch repair
lha03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LHA_1272 (dnaE)
03430 Mismatch repair
LHA_1272 (dnaE)
03440 Homologous recombination
LHA_1272 (dnaE)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lha03032
]
LHA_1272 (dnaE)
03400 DNA repair and recombination proteins [BR:
lha03400
]
LHA_1272 (dnaE)
Enzymes [BR:
lha01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LHA_1272 (dnaE)
DNA replication proteins [BR:
lha03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LHA_1272 (dnaE)
DNA repair and recombination proteins [BR:
lha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LHA_1272 (dnaE)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
PHP
HHH_6
DNA_pol_IIIA_C
tRNA_anti-codon
SSB
Motif
Other DBs
NCBI-ProteinID:
CEK10324
UniProt:
A0A0A8UU69
LinkDB
All DBs
Position
I:1288960..1292406
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AA seq
1148 aa
AA seq
DB search
MKSRFVHLRVHTEFSMVDGLVRIKPLMKSLANKGMNTIAVTDHCNLFAAVKVFKAALDAG
IKPILGSDLPCHQPGTPEQISSLILLCQNEIGYRNLTCLVSKAYQEGQYQGQPRIQYPWI
EEHAEGLIALSGGRFGAIGKALLAEDESGAYALAQSFMKLFPNRFYLEIQRTGRTYETEY
NERVVRLAEELNLPLVATNDVRFLQKEDYEAHEARVCIHEGYTLADPRRQQLYSAQQYLR
SADEMVALFKDLPQALENTVEIAKRCTVKLDLGNNYLPNFPIPAGSTVENYLSDLSKKGL
EERLQQIFRDKTPDAIELLREPYDKRLQIELDVINSMGFPGYFLIVADFIQWAKKNGVPV
GPGRGSGAGSLVAYALKITDLDPLLYELLFERFLNPERVSMPDFDIDFCMEGRDRVIEYV
AEKYGRQSVSQIITFGTMAAKAVVRDVGRVLGHPYGFVDKIAKLIPFEIGMTLNKALEDE
EELKRRYDDEEDVKELIDLALKLEGITRNAGKHAGGVVIAPSKLTDFTAIYCEQGSTQIV
SQFDKDDVEAAGLVKFDFLGLRTLTIIDWALAIVNKQRVAQGETPIDISLIPTDDKKTFD
LLMACQTTAVFQLESRGMKELIHRLQPDCFEDIIALVALFRPGPLQSGMVDDFIDRKHGR
AKVEYPHPDLEPILKPTYGVILYQEQVMQIAQVLANYTLGGADLLRRAMGKKKPEEMAKQ
REIFTEGATARGVAEETATYIFDLMEKFAGYGFNKSHSAAYALVAYQTAWLKAHYPAAFM
AAVMSSDMDNTDKVVTFIDECVQMKLKVLPPAINQSHYQFTVADDKTILYGLGAIKGVGE
TAINCIVEEREGGGSYAGLFSFCQRMDLRKVNRRVLEALIKSGAMDCWNVERAVLFASLD
KALKLADKTHQNQNSGQTDLFSMLEEAVNQEDYVESKPWPDMMRLNGEKETLGLYLTGHP
ANQYTQEFKTFVTPIARLNPSTAKKACICGLVISLRRVMTKRGKKLTIIGIEDSSNKMDV
VVFSEVYEVQQTNVQVGEMLIVEGEIAPDEYSGGIKMTASQLYSIDEARTRFAKCITIDL
SAKEQGILPTLQSILKTNTGECVVQVRYLGNSARAALNLGTQWRVVPSDSLLMTLGELLG
AENVNLSY
NT seq
3447 nt
NT seq
+upstream
nt +downstream
nt
atgaaatcgcgttttgttcatttgcgggtacataccgaattttctatggttgatggatta
gtgcgtataaaaccgcttatgaaatccttggccaacaaaggtatgaatacaattgctgtt
acggatcactgcaatttatttgcagcagttaaagtgtttaaagcagcattggacgcaggt
attaaacctattttggggagtgatttaccctgtcatcaacccggaactccagaacaaatc
agttcgcttattttattgtgtcaaaatgagatagggtatcgaaatttaacatgcctggtg
tctaaagcctatcaggaggggcaataccaaggccagccaagaatccaatatccctggatt
gaggagcatgcagaagggctcattgccttatcagggggacgatttggagcgataggtaaa
gcattgcttgccgaggatgaatcaggtgcatacgctttggcccaatctttcatgaagcta
ttccccaaccgtttttatttggaaatacagagaacggggcgaacgtatgaaacagaatat
aatgagcgcgtagtgcgtttggcagaagagctgaatttgcctctggtggcaaccaacgac
gtgcgtttcctgcaaaaagaagattatgaggctcatgaagcacgggtttgcatccatgaa
gggtacaccttagctgatccaagacgacagcaactatatagtgcccagcaatatctgcgc
tcggccgacgaaatggtggctttgtttaaagatttgcctcaagccttggaaaatacagtt
gaaattgccaaacgctgcacggtcaaactggatttaggcaacaattatttgcccaatttt
ccaattccggcaggctcaacggtggaaaattatttatcggatttgtcaaagaaaggttta
gaagaacgccttcaacaaatttttcgtgacaaaacacccgatgcaatcgaacttttgcgt
gagccctacgataagcgcttacagatagagcttgatgtaatcaacagcatgggattcccc
ggatacttcctgattgtggccgattttatacagtgggcaaaaaaaaatggtgtccctgtc
gggcctggacggggctctggtgcgggctcactggtggcttatgcgctaaaaattaccgac
ttggatcccttgttgtatgagttactctttgagcgtttcctaaacccggaacgtgtttcc
atgcctgattttgatatcgatttttgcatggaaggacgggatagggttattgaatatgtt
gctgaaaaatacggccgtcaaagcgtgtcacaaattatcaccttcggtactatggcagct
aaagcggtggtgcgggatgtggggcgtgtccttgggcacccctatggttttgtggacaag
atagctaaattaattccttttgaaataggaatgacattaaacaaagccctcgaggatgag
gaggaattaaaacgacgttatgacgatgaagaagatgttaaagaattgattgatttagca
ttaaaacttgaggggataacacggaatgcaggtaagcatgctgggggagtggtcattgca
ccctctaaactcaccgattttacagcgatttattgtgaacaaggctccacacaaattgtc
agtcaatttgataaggatgatgtggaagcggcaggacttgttaaattcgactttttgggg
ttacggaccctaacaattattgattgggcattagcgattgttaacaaacaacgtgtcgct
cagggtgagacacctatcgatatctcacttattcccacagatgataaaaaaacatttgat
ttgctaatggcttgccagacaacagcggttttccagctggaatcccgaggaatgaaggaa
ttaattcatcggcttcaaccggattgtttcgaggatattatcgcgcttgtagcacttttc
agacccggccctttacaatcagggatggtggatgacttcattgatcgtaagcatggccgt
gccaaagttgaatacccacatccggatttggagccgattttaaagccaacctatggtgtt
atcttgtaccaggagcaggttatgcaaattgctcaggtattggcgaattatacactcggt
ggagcagatcttttacgtcgtgctatgggtaagaaaaaaccagaagagatggcaaaacaa
cgtgagatttttactgaaggtgccactgcgcgtggtgttgctgaagagacagccacctat
attttcgacttaatggaaaaatttgcgggctatggattcaataaatctcactctgctgcc
tatgcgttggttgcttaccaaacagcatggttgaaagcacattaccccgctgcctttatg
gcggctgtcatgtcttccgatatggataataccgataaagtggtcacctttatcgacgaa
tgcgtacaaatgaagcttaaggtgttgccgccggcaattaatcaatctcactatcaattt
actgttgccgatgataaaaccattctttatggtttgggtgctatcaaaggagtcggtgag
acagctattaattgtattgttgaagaacgagagggtggtggatcctatgcaggtttattt
agtttctgccaacgaatggacttgcgcaaagtcaatcgtcgagttttagaggcattaatt
aagagtggagctatggattgttggaatgtggagcgtgcggtactcttcgcatcgcttgat
aaggcattaaaactggcggataaaacacatcaaaatcaaaatagtggtcagacggatttg
ttttcgatgcttgaagaagcggtcaatcaggaagattatgtcgaatctaaaccttggcca
gatatgatgcgtttaaatggcgaaaaggaaacgctaggcttgtatttaactggacatcct
gcaaatcaatatactcaagagtttaaaacgtttgtcacgcctattgcccgattaaatcca
agtactgccaaaaaagcgtgtatttgtggtttagtcatttcattacgacgagtaatgacc
aaacgtgggaagaaactgacgatcattggaatagaggattccagtaataagatggatgtg
gtggttttttccgaagtttatgaggtacagcagaccaatgttcaggttggtgaaatgttg
attgttgaaggtgaaattgccccggatgaatatagtgggggcataaagatgacagctagt
cagctatatagtattgatgaagcccgtacgcgatttgccaaatgcattaccatcgattta
tcagctaaagagcaagggatcttaccgacactgcaatcaatactcaaaaccaacacgggt
gaatgtgtggttcaggttcgttacttaggaaatagtgcaagagcggctcttaatttaggc
acgcagtggcgtgtggttccaagtgatagtttactaatgactttaggggagttgttaggg
gcagaaaacgtaaatttaagttattaa
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