Legionella hackeliae: LHA_1872
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Entry
LHA_1872 CDS
T03809
Name
(GenBank) Uracil-DNA glycosylase family 4 protein
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lha
Legionella hackeliae
Pathway
lha03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lha00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
LHA_1872
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lha03400
]
LHA_1872
Enzymes [BR:
lha01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
LHA_1872
DNA repair and recombination proteins [BR:
lha03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
LHA_1872
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
CEK10904
UniProt:
A0A0A8UVU2
LinkDB
All DBs
Position
I:complement(1939541..1940182)
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AA seq
213 aa
AA seq
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MSHALNHYYLQTMGIDVWVSREEEATSSCEKQLSRLARNVASCSRCPLHKTRTQTVFARG
NPLAKLMIIGEAPGFYEDKQGLPFVGKAGMLLNQMLQSIGFTEEDVYIANVLKCRPPDNR
DPRPDEIVHCSSYLAKQIQIINPHLVLALGRFAGQFLANKSAPLNQLRQTVHSYNNLPFM
VSYHPAYLLRNPTDKKKAYADLLTVKKFLAERM
NT seq
642 nt
NT seq
+upstream
nt +downstream
nt
atgtcacacgcattaaatcattattatttacaaacaatgggtatagatgtctgggtttct
cgcgaagaggaagctacctcttcttgtgagaaacagctgtctcgattggcaaggaatgta
gcgtcttgttcacgttgtcctcttcataagacacgtacccaaactgtatttgctcgtggc
aatccacttgcaaaattgatgattattggtgaggcgcctggtttttatgaggataagcag
ggtttaccttttgtaggcaaagcagggatgttattaaatcaaatgctgcaaagtatcggt
tttaccgaagaagatgtttatattgcgaatgttttaaagtgtagaccaccagataatcga
gatccgagaccagatgaaattgttcactgcagtagctatttagcaaagcaaattcaaata
atcaatccccacttagttctcgctcttgggcgttttgcaggccaatttttagccaataaa
agtgccccacttaatcagctgcgacaaacagttcattcttataacaatctgccttttatg
gtcagttatcatcctgcctatttgttgcgtaatcctacggataagaaaaaggcgtatgct
gatctgctaacggtaaagaaattcttagcggaaagaatgtaa
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