Legionella hackeliae: LHA_3207
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Entry
LHA_3207 CDS
T03809
Symbol
rho
Name
(GenBank) Transcription termination factor Rho
KO
K03628
transcription termination factor Rho
Organism
lha
Legionella hackeliae
Pathway
lha03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lha00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LHA_3207 (rho)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lha03021
]
LHA_3207 (rho)
03019 Messenger RNA biogenesis [BR:
lha03019
]
LHA_3207 (rho)
Transcription machinery [BR:
lha03021
]
Prokaryotic type
Bacterial type
Other transcription-related factors
Transcription termination factor
LHA_3207 (rho)
Messenger RNA biogenesis [BR:
lha03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Other RNA degradosome components
LHA_3207 (rho)
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rho_RNA_bind
ATP-synt_ab
Rho_N
OB_RNB
S1CSD-TOTE-2
NACHT
AAA_22
Motif
Other DBs
NCBI-ProteinID:
CEK12190
UniProt:
A0A0A8UTL6
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All DBs
Position
I:complement(3374869..3376131)
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AA seq
420 aa
AA seq
DB search
MNLSELKQLPIADLVNIAQDMGAENTSRMRKQDILFAILKAHSHKGEDILGGGVLEVLTD
GFGFLRSEDGSYQAGPDDIYVSPSQIRRFGLRTGDTITGKIRPPKDNERYFALLKVDQIN
YDSPESAKRKILFENLTPLFASERLVMEQGNGSTEDLTARVVDLCAPFGRGQRGLIVSPP
KAGKTLMLQNIAHSIEKNYPECYLIVLLIDERPEEVTEMQRSVKGEVVASTFDEPANRHV
QVAEMVIEKAKRLVEHKRDVVVLLDSITRLARAYNTVVPSSGKVLTGGVDANALQRPKRL
YGAARNIEEGGSLTIIATALVDTGSKMDEVIYEEFKGTGNMEIHLSRNIAERRVFPAINI
NRSGTRREDLLLTPEELHRTWILRKILQSMDECDAIEFLIERMKNHKTNAEFFEAMKRQE
NT seq
1263 nt
NT seq
+upstream
nt +downstream
nt
atgaatcttagtgaacttaagcaattacccattgccgatcttgtcaatatcgcacaggac
atgggggctgaaaatacctcccgtatgcgtaaacaagatattctttttgctattcttaaa
gcgcattcccataaaggcgaagatattcttggcggtggtgtcttagaagtattaactgac
ggttttggttttttacgctctgaggatggttcttatcaggcaggccctgatgatatttat
gtttcgccaagtcaaatcagacggtttgggttacgcacgggcgatacgattacaggtaag
attcgcccccctaaagataacgagcgctattttgcgttactgaaagttgatcagattaat
tatgattcacctgaaagtgctaagcgcaagatattattcgaaaaccttactcctttattt
gcttcagagcgcttggtaatggagcaaggcaatggaagtacagaggatttaactgctcgt
gttgtcgatttgtgtgctccctttggacgtggccaacgtggtcttatcgtttctcctccc
aaggctggtaagacattaatgctgcaaaatattgcacattccatcgaaaaaaattatccc
gaatgttacctcatcgttctattgattgacgaacgtcctgaagaagtaacagaaatgcaa
cgctctgtaaaaggcgaagtagttgcaagtacgtttgatgaaccagcgaatcgccatgtc
caggttgcggaaatggtcattgaaaaagcgaaaagattggttgagcacaaacgcgatgtg
gtagtgcttctcgattctatcactcgtttggctcgtgcatacaacaccgtcgttccttct
tctggtaaggtactgaccgggggtgttgacgccaatgccttgcaaagaccaaaacgactt
tatggagccgctcgtaacattgaagaaggtggtagcttaaccattattgctaccgcatta
gtggacacaggctctaaaatggacgaagtaatttacgaagagtttaagggaacaggtaac
atggaaatccacttaagccgtaatattgctgaacgtcgagtattccctgctattaacatt
aatcgttctggtacccgccgtgaagatcttctgttaacacccgaggaattgcatcgtact
tggattttacgcaagattctgcaatccatggatgaatgcgatgcgattgagttcttaatt
gagcgcatgaaaaatcacaagaccaatgctgagttttttgaggccatgaaacgccaagaa
taa
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