Lactobacillus helveticus KLDS1.8701: HUO_02605
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Entry
HUO_02605 CDS
T03777
Name
(GenBank) DNA-directed RNA polymerase subunit alpha
KO
K03040
DNA-directed RNA polymerase subunit alpha [EC:
2.7.7.6
]
Organism
lhd
Lactobacillus helveticus KLDS1.8701
Pathway
lhd03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
lhd00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
HUO_02605
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lhd03021
]
HUO_02605
03400 DNA repair and recombination proteins [BR:
lhd03400
]
HUO_02605
Enzymes [BR:
lhd01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
HUO_02605
Transcription machinery [BR:
lhd03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
HUO_02605
DNA repair and recombination proteins [BR:
lhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
HUO_02605
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_A_bac
RNA_pol_A_CTD
RNA_pol_L
SAM_EPH
Motif
Other DBs
NCBI-ProteinID:
AJY60921
UniProt:
A0A0D5MGF7
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All DBs
Position
504622..505560
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AA seq
312 aa
AA seq
DB search
MIEFEKPNITVVEQEDSYGKFVVEPLERGFGTTLGNSLRRVLLTSIPGTGLVYVQIDGVL
HEFSTVPGVREDVTKIILNLKKLELKSLSDERKVIELDVEGPATVTADDLKVDADVQVLN
PDQYICTIAEGGHLHMEIAVQNGRGYVAASDNKSDDMPIGVIPVDSLFSPIKKVNYQVES
TRVGKRDDFDKLTFEIWTDGSIKPNDALSFATKILVEHFKVFESADADTKFSEVMVEKED
DKKEKKLEMTIEELDLSVRSYNCLKRAGINTLQELTDMTESDMMRVRNLGRKSLEEVKNK
LTDLGLSLRQED
NT seq
939 nt
NT seq
+upstream
nt +downstream
nt
atgattgaatttgaaaaaccaaatattaccgttgttgaacaagaagattcttacggtaag
tttgttgttgaaccacttgagcgaggctttggtactactttaggtaactctttaagaaga
gtcttacttacttctattcctggtactggacttgtttatgtgcaaattgatggcgtttta
cacgagttctcaacagttcctggcgtcagagaagatgtaaccaagattattcttaatttg
aagaagcttgaattaaagtctctttcagatgaaagaaaggttattgaattggacgttgaa
ggtcctgccacagtaactgctgatgatcttaaagttgatgcagacgttcaagtcttaaat
ccggatcaatacatttgtaccattgctgaaggtggacacttgcacatggaaatcgccgta
caaaatggtagaggttatgttgctgcaagtgacaataagagtgatgacatgccaattgga
gtaattcctgttgattctctattctcaccaattaaaaaggttaactaccaagttgaatca
actcgtgttggtaagagagacgattttgacaagctcacttttgagatttggactgacggt
tcaatcaagcctaatgacgcccttagttttgctactaagattttagttgaacatttcaaa
gtatttgaatcagctgatgcagatactaaattcagcgaagtaatggtggaaaaggaagac
gacaagaaagaaaagaaactcgaaatgacaattgaagagcttgatctttctgttcgttca
tacaactgcctgaaacgtgccggcattaacactcttcaagagttaactgatatgacagag
tcagatatgatgcgtgtacgtaacttgggacgtaaatcattggaagaagttaagaataaa
ttaaccgacttaggtctttcacttcgtcaggaagactaa
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