Lactobacillus helveticus KLDS1.8701: HUO_03080
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Entry
HUO_03080 CDS
T03777
Name
(GenBank) DNA mismatch repair protein MutS
KO
K03555
DNA mismatch repair protein MutS
Organism
lhd
Lactobacillus helveticus KLDS1.8701
Pathway
lhd03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lhd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
HUO_03080
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lhd03400
]
HUO_03080
DNA repair and recombination proteins [BR:
lhd03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
HUO_03080
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
AAA_23
AAA_29
DAP3
AAA_14
nSTAND_NTPase5
G-alpha
Motif
Other DBs
NCBI-ProteinID:
AJY60998
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Position
593161..595758
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AA seq
865 aa
AA seq
DB search
MAEKTTPMMEQYYEIKKQYPDAFLFYRVGDFYELFEDDAVKGAQILELTLTHRSNKTKNP
IPMAGVPHMAVDTYVNTLVEKGYKVALCEQLEDPKKAKGMVKRGIIQLVTPGTMMNEGPN
DAKDSNYLTSVVTTKSGFGLAYSDLSTGEIYSTHLKSFAAVSNELLSLRTREVVYSGPLT
EQNKDFLHKANITVSAPTPIEGEHAEISYVEQNLTNGAEKSATRQLVGYLLSTQKRSLAH
LQIAKSYEVNQYLQMSHTVQNNLELVASAKTGKKMGSLFWVLDKTHTAMGGRLLKQWLAR
PLLNVDIINHREKMVQALLDGYFTRENIIDALKGVYDLERLTGRIAFGNVNARELLQLSR
SLQAVPVILDALNQSDSDVLTDFAKKIDPLKGVAELISTTLVKDPPLLTTEGGLIRDGVD
KQLDRYRDAMNNGKKWLVQMETDERQKTGIENLKVGFNKVFGYYIQVSNGNKSKVPLDRY
TRKQTLTNAERYITPELKEHENLILEAKTRSTDLEYDLFVQLRDEVKKYIPALQKLGNQL
AALDVYCSFATVAEQNNYCRPSFHTDSQDIDVVNGRHPVVEKVMTAGSYIPNDVKMDSAT
NIFLITGPNMSGKSTYMRQMALIAIMAQVGSFVPADSAALPIFDQIFTRIGAADDLISGQ
STFMVEMSEANDALQYATKRSLVLFDEIGRGTATYDGMALAGAIVKYLHDKVGAKALFAT
HYHELTSLDETLDYLKNIHVGATEENGKLIFLHKILPGPADQSYGIHVAQLAGLPRAVLR
EATKLLKRLEAQGSELAPVSQQLDLFAQPEAASDEVDDNDSENSPMTDAEQEVLDDISNL
YLADKTPLQIMQMVANWQKDLKDDK
NT seq
2598 nt
NT seq
+upstream
nt +downstream
nt
atggctgagaaaacaactcctatgatggagcagtattatgaaatcaagaaacaatatcct
gacgcctttcttttttatcgcgtcggagatttttatgaattatttgaagatgatgcggtt
aaaggggcacagattctggaattaactctgactcatcgatcaaataagaccaagaaccct
attccaatggcaggcgttccacacatggctgtggatacttatgtgaatactttggttgaa
aaagggtataaagtcgctctttgtgaacaacttgaagatcctaaaaaagctaaaggcatg
gtaaagcgaggcatcattcagttagtaactccaggtaccatgatgaatgaaggacctaat
gatgctaaggattctaattatttaacttctgtggttactactaaaagtggttttggttta
gcttacagtgatttatccaccggtgaaatttattctactcatttaaagagtttcgccgca
gtttctaatgaacttttgtctttaagaacaagagaagttgtgtatagcggtccattaact
gagcaaaacaaagactttctgcacaaggctaatattacggtttctgcacctacaccaatt
gaaggcgaacatgcggaaatttcttacgttgaacaaaacttgactaatggagcagaaaag
tctgcaacgcgtcaattagttggctacttgctttcaacccaaaagagaagtttagcccac
ttacaaattgctaagagctatgaagtaaatcaatatttgcagatgtcacacactgtacaa
aataatttggaattagtggcatcagctaagaccggtaaaaagatgggctcacttttctgg
gtattggataaaactcatacagccatgggaggtcgtcttcttaagcagtggttggcccgt
ccattgttaaacgtggatatcattaatcatcgtgagaaaatggtccaagcattgcttgat
ggctatttcactcgtgaaaacattattgatgccttaaagggcgtttatgacctagaacgc
ttaacaggacggattgcctttggaaatgtaaatgcccgtgaattattgcaattatcacgt
tctttgcaagcagtcccagttattcttgatgctctcaatcaatctgacagtgatgttttg
acagattttgccaaaaaaatcgatcctttaaagggtgttgctgaattaatttctacaact
ttagtaaaagatccaccgcttttaactacagaaggtggattaatcagagatggtgtggat
aaacagcttgatcgctatcgggatgccatgaataatggtaaaaaatggctggttcaaatg
gaaactgatgaacgtcaaaagacaggaattgaaaacttaaaagtaggtttcaataaggtc
tttggttattatattcaggtttctaatggtaacaagagcaaggtgcctcttgatcgctat
actcgtaagcaaaccttaactaatgccgaacgctacattaccccagagttaaaagaacac
gaaaatctaatattagaggctaaaactcgctcaactgatctggaatatgatttatttgtt
caattgcgtgatgaagttaagaagtacattcctgctttgcaaaaattaggcaatcaatta
gctgccttggacgtttattgtagcttcgctacagttgctgaacaaaataattattgtcgt
ccatctttccatactgatagtcaagacattgatgtcgttaatggccgtcacccggttgtg
gaaaaagtaatgactgcaggttcatacattcctaatgatgtgaagatggattctgctaca
aatatctttttgattactggaccaaacatgtcaggtaagagtacttatatgcggcagatg
gcattaattgcaattatggcccaagttggttcttttgttcccgctgatagtgctgctttg
cctatttttgatcaaatttttacccgtattggtgcagccgatgatttgatctctggtcaa
agtactttcatggtggaaatgagtgaagcaaatgatgctttgcaatatgctactaaacgc
agtcttgtattattcgatgaaattggacgtggtacagctacttatgacggtatggcttta
gcaggtgcaattgttaaatatctgcatgataaagtaggagctaaagcactttttgccact
cactatcatgaattaacaagtcttgatgaaacgctggattatttgaaaaatatccatgtt
ggtgcaactgaagaaaacggtaagttaattttcttacataagattttgccaggtcctgct
gatcaaagttatggtatccatgttgcacagcttgctggcttgccacgtgccgttttacgt
gaagcaactaagttgctaaagcgtctagaagcacaaggcagtgaattggctccagttagc
caacagctagatttatttgcccaaccggaagctgcttctgatgaagtggatgataacgat
agtgaaaacagtccaatgaccgatgcggaacaagaggtgctggatgatatttctaatctt
tatttagctgataagacaccactgcagattatgcaaatggtggctaattggcaaaaagac
ttgaaggatgataaataa
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