Lactobacillus helveticus KLDS1.8701: HUO_06815
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Entry
HUO_06815 CDS
T03777
Name
(GenBank) DNA topoisomerase I
KO
K03168
DNA topoisomerase I [EC:
5.6.2.1
]
Organism
lhd
Lactobacillus helveticus KLDS1.8701
Brite
KEGG Orthology (KO) [BR:
lhd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhd03032
]
HUO_06815
03400 DNA repair and recombination proteins [BR:
lhd03400
]
HUO_06815
Enzymes [BR:
lhd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.1 DNA topoisomerase
HUO_06815
DNA replication proteins [BR:
lhd03032
]
Prokaryotic type
DNA Topoisomerases
HUO_06815
DNA repair and recombination proteins [BR:
lhd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
HUO_06815
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Topoisom_bac
Zn_ribbon_Top1
Toprim
Toprim_4
C1_2
Toprim_2
HypA
Zn_ribbon_recom
Motif
Other DBs
NCBI-ProteinID:
AJY61561
UniProt:
A0AAV4E922
LinkDB
All DBs
Position
complement(1314222..1316336)
Genome browser
AA seq
704 aa
AA seq
DB search
MPTKAKSKSKTKKHKKTLVIVESPAKAKTIEKYLGRNYHVIASKGHIRDLPKSQMGIDFE
DNYKPKYISIRGKGDTIKELKSEAKKAKEVYLASDPDREGEAIAWHIAHALNLDENAKNR
VTFNEVTKDAVKESFKHPRTIDMDTVDAQQARRVLDRIVGYSLSPILWAKVKKGLSAGRV
QSVALKLVIDREKEIKNFKPKEYWTIDAEFAKDKEKFKSAFYGVDGKKKELPNIDAVKDV
LAKIDKKKNFTVEKVVSRQRRRQPAAPFTTSTMQQEANKRLGYRTRRTMSIAQQLYEGIS
LGKQGTVGLITYMRTDSKRTSPVAQQEASKFLHENYGAEFAAKNQRHFKNQEDAQDAHEA
IRPTSVYRTPESLKDVLTKEQYRLYKLIWSRFLASEMTPAVYDTVRADIVQNGVIFRTTG
SKMKFAGFTKVYDNQQEKNVELPDLQEGDQVKMTKSDNKQHFTLPPARYTEASLVHALEK
NGVGRPSTYAPTIDTIQRRYYVKLDGRSIVPTELGEIVDTLVEEFFPDIANVDYTAHLEN
ELDEVEDGKKQWVNVVDEYYQPFKKELNKADSEIQKVQIKDEPAGFNCDICGAPMVIKMG
RYGKFYACSRFPDCRNTKPIVKKIGVVCPKCGKGEVVEKKSRRNRKFYGCSRYPECDFVS
WDKPIGRNCPNDGHFLVEKHSKKGPVTLCPNGDYREEPQENEDK
NT seq
2115 nt
NT seq
+upstream
nt +downstream
nt
atgcctactaaagcaaaaagtaaatcaaaaactaaaaaacataaaaaaactttagtcatt
gtggaatctcctgcaaaggctaaaactattgaaaaatatttaggtagaaactatcacgtt
attgcctctaaaggtcatattcgtgatttacctaagtctcaaatgggaattgactttgag
gataattacaagcccaagtatatttctattcgcggcaagggtgacacaattaaagagctt
aagagtgaagctaaaaaagctaaggaagtatatttggcatctgaccccgatcgtgaaggg
gaagctattgcttggcacattgctcatgctcttaatttagatgagaatgctaaaaaccga
gtaacttttaacgaagttaccaaggatgcagttaaagagagttttaagcatcctagaaca
atcgatatggatactgttgatgctcaacaggcacgtcgcgttcttgaccgaatcgtaggt
tactcactttccccaattttatgggcaaaagtgaaaaaaggtttgagtgctggtcgtgtt
caatctgtggccttgaagctggttattgatcgtgaaaaagagatcaagaacttcaagcct
aaagaatattggacaattgatgccgagtttgcaaaagacaaagaaaaatttaagtctgct
ttttatggtgttgatggcaaaaagaaagaattgccaaacattgatgcagttaaagatgtt
ttagcaaaaatcgataaaaagaagaactttactgttgaaaaagttgtttctcgtcaacgt
cgcagacaacctgctgcaccatttaccacttcaactatgcaacaagaggctaataagcgt
ttaggctatagaactcgtagaactatgagtatcgcacagcaattatatgaaggaattagt
ttaggtaaacaaggtactgttggactaattacctacatgagaactgactctaagcgaact
tctccagttgctcaacaagaagcttcaaaattcttgcatgaaaattacggggcagaattt
gctgctaaaaatcaaagacattttaagaatcaagaagatgctcaagatgcccacgaagca
attcgcccaactagcgtatatagaacaccagaatcattgaaagatgttttaactaaagaa
caatatcgtttgtacaagttgatctggtcacgtttcttggctagtgaaatgacaccagct
gtttatgacactgtcagagcagatattgtacaaaatggcgtaatttttagaactaccggt
tcaaaaatgaaatttgctggtttcacaaaggtttatgataaccaacaagaaaagaacgtt
gaattgccagacttgcaagaaggcgaccaggtaaaaatgaccaagtcagataataagcag
cactttactttgccacctgctcgttatactgaagctagcttggttcatgctctagaaaaa
aacggtgttggtcgtccgtcaacttatgcacctacaatcgatacaattcaacgccgctat
tatgttaagttagatggtcgttcaattgttccaactgaattaggagaaattgttgataca
ttagttgaagaatttttcccagatattgctaacgtagactatacagctcatcttgaaaat
gaattagatgaagttgaagacggtaaaaagcaatgggtaaacgtagttgacgaatattac
caaccatttaagaaagaattgaataaagcagatagcgaaattcaaaaagtgcaaattaaa
gatgaaccggctggatttaactgtgatatctgtggtgcgccaatggtaattaaaatggga
cgttacggcaagttctatgcatgttctcgtttcccagattgtcgtaatacaaagccaatt
gtgaaaaagattggcgtagtttgtcctaaatgtggtaaaggcgaagtagtagaaaagaaa
tcacgtagaaatcgtaaattctacggctgttcacgctacccagaatgtgattttgtatca
tgggacaaaccaattggcagaaactgccctaatgatggtcacttcttagtagaaaaacat
tctaagaaaggtccagtaaccttgtgtccaaatggcgattaccgtgaggaaccacaagaa
aatgaagataaataa
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