Lactobacillus helveticus DPC 4571: lhv_0006
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Entry
lhv_0006 CDS
T00625
Name
(GenBank) DNA gyrase
KO
K02469
DNA gyrase subunit A [EC:
5.6.2.2
]
Organism
lhe
Lactobacillus helveticus DPC 4571
Brite
KEGG Orthology (KO) [BR:
lhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lhe03032
]
lhv_0006
03400 DNA repair and recombination proteins [BR:
lhe03400
]
lhv_0006
Enzymes [BR:
lhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
lhv_0006
DNA replication proteins [BR:
lhe03032
]
Prokaryotic type
DNA Topoisomerases
lhv_0006
DNA repair and recombination proteins [BR:
lhe03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
lhv_0006
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_topoisoIV
DNA_gyraseA_C
Motif
Other DBs
NCBI-ProteinID:
ABX26303
UniProt:
A8YW46
LinkDB
All DBs
Position
6403..8886
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AA seq
827 aa
AA seq
DB search
MDDNQTQDRRIRNVDLTSMMRSSFLDYAMSVIVARALPDVRDGLKPVQRRILYGMSELGV
TPDKPYKKSARIVGEVMGKFHPHGDSSIYLAMAHMAQDFSYRYMLVDGHGNFGSVDGDEP
AAMRYTEARMSKIAAEMLRDINKNTIDWQRNYDDTENEPVVLPARIPNLLINGANGIAVG
MTTNIPPHNLSEVISGLHMLMKNPDATTKDLMKVIPGPDFPTGGIIMGRGGIYRAYESGK
GNIVVRAETNIETEKSGRERIIVSEIPYMVNKAELVKKIADLAREKIIDGITGVRDESDQ
TGMRITIDIRRDASASVVLNNLFKQTQMQANFGMNMVAIVDGAPHYLTLKQMLQYYLDHQ
KDVVTRRTKFELAKAEARAHILEGLRIALDNIDEIVHIIRSSHSSDIAKATLISRFGLDD
KQSQAILDMRLVRLTGLERDKVEAEYKELQAKIADYKDILAKPERIDKIIYDELLDIQKR
FGDKRRTEIGASEVVSIEDEDLIEKQNILLTVTHNSYIKRMPIQEFKTQNRGGKGIKGMG
VQDGDFIEHLIYSSTHDMLLFFTNAGKVYSKKAYEIPEYGRMAKGLPVVNLLQLEKGEKV
QTVINVPEGADDNYLFFITKMGTVKRTHVSEFSNIRNSGLIALTLRDGDELSNVLTTDGK
QNILIGTHLGYAVTFNENDVRAMGRTAAGVRGINLRDHDYVVGSGVLDADDQVLVISEKG
YGKRTPAAEYPVKGRGGKGIKTANITEKNGPLAGVIVISKGKDIMVITTDGIMIRFKTKD
VSQTGRSTMGVRLIKVSDDSQVASLTIVPSEADQDQVDDEDDNDDNE
NT seq
2484 nt
NT seq
+upstream
nt +downstream
nt
atggacgataatcaaactcaagatcgtagaattagaaacgtcgatttaactagcatgatg
cgtagttctttcttggactatgcaatgtcagttattgtagctcgtgctttgcctgatgtt
cgtgatggtttgaagcctgtacagcgccgtattctttacggaatgagcgaattaggtgtt
acacctgataagccatataagaagagtgccagaattgttggggaagttatgggtaagttt
cacccacacggtgactcatcaatttatttagctatggctcacatggcacaagacttttca
tatcgttacatgctagttgacggtcacggtaactttggttccgtcgacggggatgaacca
gccgcaatgcgttataccgaagcaagaatgagtaaaatcgctgcggaaatgcttcgtgat
atcaacaaaaatacaatcgactggcaaagaaactatgatgatactgaaaatgaaccagta
gttttgccagctagaattcctaacttgttgattaacggtgctaatggtatcgctgttggt
atgacaaccaacattccacctcataacttaagtgaagtaattagcggtttgcatatgttg
atgaaaaatcctgatgcgactactaaggatttgatgaaagttattccaggtcctgatttt
ccaactggtggtattatcatgggtcgcggtggaatttaccgtgcttatgaaagtggcaag
ggcaatatcgttgttcgtgctgaaaccaacattgaaactgaaaagagtggccgtgaaaga
attatcgttagcgaaattccttacatggtcaacaaggctgaattagttaaaaagattgca
gatttagctcgtgaaaagatcattgatggtattaccggtgttcgcgatgaatctgaccag
actggtatgagaattaccatcgatattcgtcgggatgctagtgcgagtgttgttttgaat
aatttattcaagcaaactcaaatgcaggccaacttcggcatgaacatggttgccattgtt
gacggtgcacctcactacttaactttgaagcaaatgttgcaatactacttggatcaccaa
aaagatgttgtaacgcgtagaactaagttcgaattagccaaggctgaagctagagctcat
attcttgaaggtttaagaatcgctctagataatatcgatgaaattgttcatattatccgt
agcagtcattcaagtgatattgctaaagcaactttaattagtcgttttggtcttgatgat
aagcaatctcaagcaattttggatatgcgtcttgtacgtttaaccggtttggaacgagac
aaggttgaagccgaatataaagaattgcaagctaagattgctgactacaaggatattttg
gctaagcctgaacgaatcgataagatcatttacgatgaattattagatattcaaaaacgt
tttggtgataagcgtagaactgaaatcggtgctagtgaagttgtttcaattgaagacgaa
gatttaattgaaaagcaaaatattcttttgactgtaactcataatagctatatcaagaga
atgccaattcaagaatttaagacccaaaaccgtggtggtaaaggtatcaagggtatgggc
gttcaagatggcgacttcattgaacacctaatttactcaagtactcacgacatgcttttg
ttctttactaatgctggtaaagtttactcaaagaaagcatatgagattccagaatatggt
cgtatggccaaaggcttgcctgtagttaacttgcttcaacttgaaaagggtgaaaaggta
caaactgtaatcaacgttccagaaggggcagatgataattacttattcttcatcactaag
atgggtaccgtaaaacgcactcatgtcagtgaattttcaaacattagaaatagtggtttg
attgctcttactttgcgtgatggggatgaattaagcaatgtccttactactgacggtaag
caaaacattttaattggtactcatttaggctatgcagtaacctttaacgaaaatgatgtt
cgtgctatgggtagaactgctgcaggtgttcgcggaattaacttgcgtgatcatgactat
gtagttggttcaggcgtattagatgcagacgaccaggtattagtcatttctgaaaagggt
tatggtaagcgtactccggctgcagaatatccagttaagggccgtggtggtaaaggtatc
aagactgctaatatcactgaaaagaatggtccacttgctggcgtaattgtcattagcaag
ggcaaggacatcatggttatcactaccgatggtattatgattcgctttaagactaaggat
gtttctcaaactggacgtagcaccatgggtgttcgcttaatcaaggttagcgatgatagt
caagttgcaagtttaaccattgttccatctgaagctgatcaagatcaagttgatgatgaa
gatgacaatgatgataatgagtaa
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