Lactobacillus helveticus DPC 4571: lhv_0342
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Entry
lhv_0342 CDS
T00625
Name
(GenBank) tRNA pseudouridine synthase A
KO
K06173
tRNA pseudouridine38-40 synthase [EC:
5.4.99.12
]
Organism
lhe
Lactobacillus helveticus DPC 4571
Brite
KEGG Orthology (KO) [BR:
lhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
lhe03016
]
lhv_0342
Enzymes [BR:
lhe01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.12 tRNA pseudouridine38-40 synthase
lhv_0342
Transfer RNA biogenesis [BR:
lhe03016
]
Eukaryotic type
tRNA modification factors
Psudouridine synthases
lhv_0342
Prokaryotic type
lhv_0342
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_1
DUF6459
Motif
Other DBs
NCBI-ProteinID:
ABX26566
UniProt:
A8YTB0
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All DBs
Position
340427..341218
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AA seq
263 aa
AA seq
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MTTRYKMTMAYDGHLFHGFQLQPDQRTVQGTVEDALKKMTKGKRIIVQGSGRTDAGVHAI
GQVIHFDYPGKTIPANRMILALNSMMPTDIIFNNCEIVNENFHARYSIKGKWYRYRVSLD
HFVNPFKRFYTGHFSYALDVGKMQEAAKDLLGKHDFTSFAASGGQIEDKVRTIYYVNIAK
DEKENEIVFDFIGSGFLYNMVRIMVAALLEIGNGRRPVHDLKRVIAAKDRQEVRQTAQAS
GLYLYHVFYDEYHKNIDRTGIYN
NT seq
792 nt
NT seq
+upstream
nt +downstream
nt
atgacaactagatataagatgacaatggcatacgatggtcatttattccatggctttcag
ttgcaaccggatcaacgtacagttcaagggaccgttgaagatgcattaaagaaaatgact
aagggaaagcgaattatcgttcaaggctcgggtagaacagatgctggtgttcacgccatt
ggacaagtaatccattttgattatcctggtaaaactattccggctaatcggatgatttta
gcattaaattcaatgatgccgactgatattatttttaataattgtgaaatagttaatgag
aatttccatgctagatattctatcaaaggtaaatggtatcgctacagagtaagtttggat
cattttgttaatccttttaagcgattctacacaggacatttttcttatgcattggatgta
gggaaaatgcaagaagccgctaaagacttgctaggcaagcatgattttactagctttgca
gcaagcggtggacagatagaggataaggttagaactatttattatgtgaacattgctaaa
gatgaaaaagaaaatgaaatagtatttgattttattggttctggttttttatacaatatg
gttcgaattatggttgctgcattgcttgaaattggcaatggaaggcgcccggttcatgat
ttgaagcgtgtaattgccgctaaagatagacaagaagtacgacaaactgctcaagcaagt
ggtctttatctatatcacgttttttatgatgaataccacaaaaatatcgacaggaccggc
atttataattga
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