Lactobacillus helveticus DPC 4571: lhv_0435
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Entry
lhv_0435 CDS
T00625
Name
(GenBank) putative RNA helicase
KO
K18692
ATP-dependent RNA helicase CshB [EC:
5.6.2.7
]
Organism
lhe
Lactobacillus helveticus DPC 4571
Brite
KEGG Orthology (KO) [BR:
lhe00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lhe03019
]
lhv_0435
03009 Ribosome biogenesis [BR:
lhe03009
]
lhv_0435
Enzymes [BR:
lhe01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
lhv_0435
Messenger RNA biogenesis [BR:
lhe03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
lhv_0435
Ribosome biogenesis [BR:
lhe03009
]
Prokaryotic type
rRNA helicases
lhv_0435
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
CMS1
Motif
Other DBs
NCBI-ProteinID:
ABX26643
UniProt:
A8YTI7
LinkDB
All DBs
Position
420511..421872
Genome browser
AA seq
453 aa
AA seq
DB search
MNNIFADSRIRPAIQEGLKKIHFEKPTKVQEKVIPAMLSDLSVVVQAATGSGKTHAYLVP
IFNEIDEDAHYVQAIVTLPSRELADQLYQVARQLRDAAGMHFSIAHLAGGTDRERQLEKY
QNNTPQLVIATPGRLLDFVQKKVFVVDQVKTFVIDEADMTLDMGFLADIDQVASKMPKDV
QIAAFSATIPVKLSNFLRKYMAHPDQIVIDNPSVIAPTIKNDLLDIGSKNRKSVLYKLLT
MGQPYLALVFANTKQTVDELTRYLQDQGLKVAKIHGGVTERERKRTLRQVEQGQFQYVVA
SDLAARGLDIDGVSLVINYEIPRDIEFVIHRIGRTGRNGLSGHAITLIREEEMNRIEDLE
KMGVHFDFVEIKNGELVPRKHYRSRENRQVKNHKFDTKLVGYVKKEKRKRKPGYKKKIKR
AIQEDNRQKRKLEQRHEIRKAKRLRKRKREQGR
NT seq
1362 nt
NT seq
+upstream
nt +downstream
nt
atgaataatattttcgcagattccagaattagaccagctattcaagagggtttaaagaag
atccattttgaaaagccaactaaggtgcaggaaaaagttattccagcaatgctttctgat
ttaagtgttgtggtgcaagctgcaaccgggtcaggtaagacgcatgcttatttggtgcct
atctttaatgaaattgatgaagatgctcactatgtgcaagcaattgtgactttgcctagt
cgagagcttgctgatcaactttatcaagtagcacgtcaattaagagatgcggcagggatg
cacttttctattgcccaccttgctggtggaacggaccgtgaacgtcagttagaaaagtac
caaaataatacgccacagttggtaattgccactccgggacgacttttggactttgtacaa
aaaaaggtattcgttgttgatcaagttaagacttttgtcatcgacgaagctgatatgact
cttgacatgggctttttggctgatattgatcaagtagcaagcaagatgcctaaggatgta
caaattgcagccttttcagctactattccagttaagctatctaactttttgcgtaagtac
atggctcatccagatcaaatcgtgatcgataatccgagtgtcattgcacctacaattaag
aatgatttgcttgatattggctcaaagaatcgtaagagtgttttgtacaagttattgact
atgggtcaaccttacttggctttggtttttgctaatacaaaacaaactgttgatgaatta
actagatacttgcaagatcaaggcttaaaggtagctaagattcatggtggggtaactgag
cgagaaagaaagcggactttgcgtcaagttgagcaaggacaatttcaatatgttgttgcc
tctgacttagcagcccgtggtcttgatatcgatggtgttagtttagttattaattatgaa
attccacgtgatatcgaatttgtaattcaccggattggtcgtaccggccgtaatggttta
tcaggtcatgcgattactttaattcgtgaagaagaaatgaaccggatcgaagatttggaa
aagatgggcgttcatttcgactttgttgaaattaagaatggtgaattagtaccacgtaag
cattaccgcagtcgtgagaatcgtcaggttaagaatcacaagtttgatactaagttagta
ggttacgttaaaaaggaaaaacgtaagcgtaagcctggctacaagaagaagattaagcga
gcaattcaagaagataatcgtcaaaagcgtaagcttgaacaacgtcatgaaattagaaaa
gctaagcgtttgagaaagcgtaagcgtgaacaaggacgttaa
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